RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 CHRFAM7AQ494W8 412 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 GTDC1Q4AE62 458 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 HIKESHIQ53FT3 197 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 RPS26P11Q5JNZ5 115 aaPredicted RBP12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 C6orf10Q5SRN2 563 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 PRAMEF8Q5VWM4 474 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 PRAMEF7Q5VXH5 474 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 CREB3L2Q70SY1 520 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 CLIP4Q8N3C7 705 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 STK35Q8TDR2 534 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 VPS33AQ96AX1 596 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 C3orf49Q96BT1 292 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 AURKBQ96GD4 344 aaPredicted RBP12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 ZNF317Q96PQ6 595 aaPredicted RBP12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 ALKBH3Q96Q83 286 aaPredicted RBP12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 SPATA9Q9BWV2 254 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 MANSC1Q9H8J5 431 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 TMEM45AQ9NWC5 275 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 NKIRAS1Q9NYS0 192 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 MOKQ9UQ07 419 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 RASD1Q9Y272 281 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 IFT52Q9Y366 437 aa12.85□□□□□ -0.35
CCHCR1-229ENST00000512418 MXRA5Q9NR99 2828 aa12.84□□□□□ -0.35
CCHCR1-229ENST00000512418 FBN3Q75N90 2809 aa12.84□□□□□ -0.35
CCHCR1-229ENST00000512418 TMEM229AB2RXF0 380 aa12.84□□□□□ -0.35
CCHCR1-229ENST00000512418 KLF11O14901 512 aa12.84□□□□□ -0.35
CCHCR1-229ENST00000512418 UBDO15205 165 aa12.84□□□□□ -0.35
CCHCR1-229ENST00000512418 SELENOPP49908 381 aa12.84□□□□□ -0.35
CCHCR1-229ENST00000512418 POLR2JP52435 117 aaKnown RBP12.84□□□□□ -0.35
CCHCR1-229ENST00000512418 TBRG1Q3YBR2 411 aa12.84□□□□□ -0.35
CCHCR1-229ENST00000512418 MAVSQ7Z434 540 aa12.84□□□□□ -0.35
CCHCR1-229ENST00000512418 SERPINA11Q86U17 422 aa12.84□□□□□ -0.35
CCHCR1-229ENST00000512418 OR9I1Q8NGQ6 314 aa12.84□□□□□ -0.35
CCHCR1-229ENST00000512418 OR1K1Q8NGR3 316 aa12.84□□□□□ -0.35
CCHCR1-229ENST00000512418 C10orf105Q8TEF2 133 aa12.84□□□□□ -0.35
CCHCR1-229ENST00000512418 SLC35B4Q969S0 331 aa12.84□□□□□ -0.35
CCHCR1-229ENST00000512418 OR52B2Q96RD2 323 aa12.84□□□□□ -0.35
CCHCR1-229ENST00000512418 KCNS3Q9BQ31 491 aa12.84□□□□□ -0.35
CCHCR1-229ENST00000512418 CHST2Q9Y4C5 530 aa12.84□□□□□ -0.35
CCHCR1-229ENST00000512418 IGHV1-18A0A0C4DH31 117 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 FTCDNL1E5RQL4 147 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 ZNF500O60304 480 aaPredicted RBP12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 AHSA1O95433 338 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 F12P00748 615 aaPredicted RBP12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 UBE2NP61088 152 aaKnown RBP12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 FADDQ13158 208 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 SWI5Q1ZZU3 235 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 ZNF311Q5JNZ3 666 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 NIPAL3Q6P499 406 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 EPHX4Q8IUS5 362 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 MIER2Q8N344 545 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 MFSD8Q8NHS3 518 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 GTF2H4Q92759 462 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 PROX1Q92786 737 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 SLC38A2Q96QD8 506 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 KATNB1Q9BVA0 655 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 LINC00470Q9BZP3 86 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 RAD21L1Q9H4I0 556 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 MOV10Q9HCE1 1003 aaKnown RBP12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 BCL2L10Q9HD36 194 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 A4GALTQ9NPC4 353 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 CDC42EP3Q9UKI2 254 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 PCDHB14Q9Y5E9 798 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 FKBP7Q9Y680 259 aa12.83□□□□□ -0.36
CCHCR1-229ENST00000512418 ARFGEF3Q5TH69 2177 aa12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 ARPC4-TTLL3A0A0A6YYG9 625 aa12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 CLIC1O00299 241 aa12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 LGI1O95970 557 aa12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 CRYAAP02489 173 aa12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 PNMTP11086 282 aa12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 BMP2P12643 396 aa12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 GTF2E2P29084 291 aaKnown RBP12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 SH3BGRP55822 239 aaPredicted RBP12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 MAGOHP61326 146 aaKnown RBP12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 SNRPD2P62316 118 aaKnown RBP12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 LGALS3BPQ08380 585 aa12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 RGNQ15493 299 aa12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 MST1LQ2TV78 715 aa12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 BBS10Q8TAM1 723 aa12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 MAGEE2Q8TD90 523 aaPredicted RBP12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 NANOS1Q8WY41 292 aaKnown RBP12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 MAL2Q969L2 176 aa12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 FBXO17Q96EF6 278 aa12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 PTDSS2Q9BVG9 487 aa12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 PAIP1Q9H074 479 aaKnown RBP12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 CA10Q9NS85 328 aa12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 TMEM160Q9NX00 188 aa12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 RCE1Q9Y256 329 aa12.82□□□□□ -0.36
CCHCR1-229ENST00000512418 STAB1Q9NY15 2570 aa12.81□□□□□ -0.36
CCHCR1-229ENST00000512418 RNF212BA8MTL3 300 aa12.81□□□□□ -0.36
CCHCR1-229ENST00000512418 C5orf58C9J3I9 102 aa12.81□□□□□ -0.36
CCHCR1-229ENST00000512418 UPK3AO75631 287 aa12.81□□□□□ -0.36
CCHCR1-229ENST00000512418 PDE5AO76074 875 aa12.81□□□□□ -0.36
CCHCR1-229ENST00000512418 LY6HO94772 140 aa12.81□□□□□ -0.36
CCHCR1-229ENST00000512418 NUDT7P0C024 238 aa12.81□□□□□ -0.36
CCHCR1-229ENST00000512418 FAM157CP0CG43 387 aa12.81□□□□□ -0.36
CCHCR1-229ENST00000512418 ZNF43P17038 809 aa12.81□□□□□ -0.36
CCHCR1-229ENST00000512418 USF1P22415 310 aaPredicted RBP12.81□□□□□ -0.36
CCHCR1-229ENST00000512418 RPS5P46782 204 aaKnown RBP12.81□□□□□ -0.36
CCHCR1-229ENST00000512418 EGR4Q05215 589 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms