RNA–Protein interactions for RNA: ENST00000511663.5

SH3BP2-220, Transcript of SH3 domain binding protein 2, humanhuman

TSL 5

Gene SH3BP2, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-220ENST00000511663 PDLIM4P50479 330 aa16.83■□□□□ 0.28
SH3BP2-220ENST00000511663 LSM11P83369 360 aaKnown RBP eCLIP16.83■□□□□ 0.28
SH3BP2-220ENST00000511663 SLC25A3Q00325 362 aa16.83■□□□□ 0.28
SH3BP2-220ENST00000511663 ZNF311Q5JNZ3 666 aa16.83■□□□□ 0.28
SH3BP2-220ENST00000511663 RNF220Q5VTB9 566 aa16.83■□□□□ 0.28
SH3BP2-220ENST00000511663 NIPAL3Q6P499 406 aa16.83■□□□□ 0.28
SH3BP2-220ENST00000511663 CREB3L2Q70SY1 520 aa16.83■□□□□ 0.28
SH3BP2-220ENST00000511663 RTTNQ86VV8 2226 aa16.83■□□□□ 0.28
SH3BP2-220ENST00000511663 STK35Q8TDR2 534 aa16.83■□□□□ 0.28
SH3BP2-220ENST00000511663 SLC25A36Q96CQ1 311 aa16.83■□□□□ 0.28
SH3BP2-220ENST00000511663 BOD1Q96IK1 185 aa16.83■□□□□ 0.28
SH3BP2-220ENST00000511663 RAD21L1Q9H4I0 556 aa16.83■□□□□ 0.28
SH3BP2-220ENST00000511663 NKIRAS1Q9NYS0 192 aa16.83■□□□□ 0.28
SH3BP2-220ENST00000511663 ZIM2Q9NZV7 527 aa16.83■□□□□ 0.28
SH3BP2-220ENST00000511663 RPS6KB2Q9UBS0 482 aa16.83■□□□□ 0.28
SH3BP2-220ENST00000511663 LPAR3Q9UBY5 353 aa16.83■□□□□ 0.28
SH3BP2-220ENST00000511663 DSPPQ9NZW4 1301 aa16.82■□□□□ 0.28
SH3BP2-220ENST00000511663 TMEM120BA0PK00 339 aa16.82■□□□□ 0.28
SH3BP2-220ENST00000511663 UBDO15205 165 aa16.82■□□□□ 0.28
SH3BP2-220ENST00000511663 LGI1O95970 557 aa16.82■□□□□ 0.28
SH3BP2-220ENST00000511663 SERPINF1P36955 418 aa16.82■□□□□ 0.28
SH3BP2-220ENST00000511663 POLR2JP52435 117 aaKnown RBP16.82■□□□□ 0.28
SH3BP2-220ENST00000511663 TBRG1Q3YBR2 411 aa16.82■□□□□ 0.28
SH3BP2-220ENST00000511663 MSANTD1Q6ZTZ1 278 aa16.82■□□□□ 0.28
SH3BP2-220ENST00000511663 CLIP4Q8N3C7 705 aa16.82■□□□□ 0.28
SH3BP2-220ENST00000511663 OR1K1Q8NGR3 316 aa16.82■□□□□ 0.28
SH3BP2-220ENST00000511663 TMEM19Q96HH6 336 aa16.82■□□□□ 0.28
SH3BP2-220ENST00000511663 ZNF317Q96PQ6 595 aaPredicted RBP16.82■□□□□ 0.28
SH3BP2-220ENST00000511663 SLC38A2Q96QD8 506 aa16.82■□□□□ 0.28
SH3BP2-220ENST00000511663 VRK1Q99986 396 aaPredicted RBP16.82■□□□□ 0.28
SH3BP2-220ENST00000511663 PIMREGQ9BSJ6 248 aa16.82■□□□□ 0.28
SH3BP2-220ENST00000511663 SHARPINQ9H0F6 387 aa16.82■□□□□ 0.28
SH3BP2-220ENST00000511663 TMEM160Q9NX00 188 aa16.82■□□□□ 0.28
SH3BP2-220ENST00000511663 ALPK2Q86TB3 2170 aa16.82■□□□□ 0.28
SH3BP2-220ENST00000511663 ZANQ9Y493 2812 aa16.82■□□□□ 0.28
SH3BP2-220ENST00000511663 A0A096LNT2 108 aa16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 C5orf58C9J3I9 102 aa16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 NDUFS8O00217 210 aa16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 FRS3O43559 492 aa16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 SNNO75324 88 aaPredicted RBP16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 HOXB1P14653 301 aaPredicted RBP16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 ZNF43P17038 809 aa16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 GZMKP49863 264 aa16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 SELENOPP49908 381 aa16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 MVDP53602 400 aa16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 WDR4P57081 412 aaKnown RBP16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 MAPK11Q15759 364 aa16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 CARTPTQ16568 116 aa16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 SWI5Q1ZZU3 235 aa16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 RPS26P11Q5JNZ5 115 aaPredicted RBP16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 SLC46A3Q7Z3Q1 461 aa16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 MIER2Q8N344 545 aa16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 MFSD8Q8NHS3 518 aa16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 KATNB1Q9BVA0 655 aa16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 SLC6A13Q9NSD5 602 aa16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 FBXO9Q9UK97 447 aaPredicted RBP16.81■□□□□ 0.28
SH3BP2-220ENST00000511663 IGHV1-18A0A0C4DH31 117 aa16.8■□□□□ 0.28
SH3BP2-220ENST00000511663 B9A039 149 aa16.8■□□□□ 0.28
SH3BP2-220ENST00000511663 PRG2P13727 222 aa16.8■□□□□ 0.28
SH3BP2-220ENST00000511663 SH3BGRP55822 239 aaPredicted RBP16.8■□□□□ 0.28
SH3BP2-220ENST00000511663 C1DQ13901 141 aaKnown RBP16.8■□□□□ 0.28
SH3BP2-220ENST00000511663 GGTLC2Q14390 218 aa16.8■□□□□ 0.28
SH3BP2-220ENST00000511663 ANKRD16Q6P6B7 361 aa16.8■□□□□ 0.28
SH3BP2-220ENST00000511663 SERPINA11Q86U17 422 aa16.8■□□□□ 0.28
SH3BP2-220ENST00000511663 NANOS1Q8WY41 292 aaKnown RBP16.8■□□□□ 0.28
SH3BP2-220ENST00000511663 C3orf49Q96BT1 292 aa16.8■□□□□ 0.28
SH3BP2-220ENST00000511663 MAELQ96JY0 434 aaKnown RBP16.8■□□□□ 0.28
SH3BP2-220ENST00000511663 ALKBH3Q96Q83 286 aaPredicted RBP16.8■□□□□ 0.28
SH3BP2-220ENST00000511663 LINC00470Q9BZP3 86 aa16.8■□□□□ 0.28
SH3BP2-220ENST00000511663 MYOZ1Q9NP98 299 aaPredicted RBP16.8■□□□□ 0.28
SH3BP2-220ENST00000511663 SDR39U1Q9NRG7 319 aaPredicted RBP16.8■□□□□ 0.28
SH3BP2-220ENST00000511663 CA10Q9NS85 328 aa16.8■□□□□ 0.28
SH3BP2-220ENST00000511663 RAB21Q9UL25 225 aa16.8■□□□□ 0.28
SH3BP2-220ENST00000511663 A0A096LPE4 126 aa16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 A0A1W2PPZ6 126 aa16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 CLIC1O00299 241 aa16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 OR2T1O43869 369 aa16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 LMX1BO60663 402 aa16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 LY6HO94772 140 aa16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 ERCC1P07992 297 aaPredicted RBP16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 RPS5P46782 204 aaKnown RBP16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 SLC18A1P54219 525 aa16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 CLDN17P56750 224 aa16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 IL1RL1Q01638 556 aa16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 MST1LQ2TV78 715 aa16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 IQCCQ4KMZ1 466 aa16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 SLC9B1Q4ZJI4 515 aa16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 VHLLQ6RSH7 139 aa16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 EPHX4Q8IUS5 362 aa16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 ZNF540Q8NDQ6 660 aa16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 OR4F15Q8NGB8 312 aa16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 BBS10Q8TAM1 723 aa16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 MAGEE2Q8TD90 523 aaPredicted RBP16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 BCL2L2Q92843 193 aaPredicted RBP16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 SLC35B4Q969S0 331 aa16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 VPS33AQ96AX1 596 aa16.79■□□□□ 0.28
SH3BP2-220ENST00000511663 ARPC4-TTLL3A0A0A6YYG9 625 aa16.78■□□□□ 0.28
SH3BP2-220ENST00000511663 NR5A2O00482 541 aa16.78■□□□□ 0.28
SH3BP2-220ENST00000511663 AKAP8O43823 692 aaKnown RBP16.78■□□□□ 0.28
SH3BP2-220ENST00000511663 NPIPB7O75200 414 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms