RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 TEX13CA0A0J9YWL9 993 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 A0A1W2PNU3 283 aaPredicted RBP7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 LINC00587B1AMM8 73 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 PRSS44E7EML9 344 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 PLA2G10O15496 165 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 KCNK5O95279 499 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 UBE2MP61081 183 aaKnown RBP7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 NTRK2Q16620 822 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 SLC35F1Q5T1Q4 408 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 RTL4Q6ZR62 310 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 ESPNLQ6ZVH7 1005 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 TRILQ7L0X0 811 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 SSX6Q7RTT6 188 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 MS4A15Q8N5U1 240 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 CT55Q8WUE5 264 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 RNF170Q96K19 258 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 OR7D2Q96RA2 312 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 MUC13Q9H3R2 512 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 ZNF160Q9HCG1 818 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 SIRT3Q9NTG7 399 aaPredicted RBP7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 SIDT1Q9NXL6 827 aaKnown RBP7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 TAS2R3Q9NYW6 316 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 ASH2LQ9UBL3 628 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 IL17BQ9UHF5 180 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 KLHL21Q9UJP4 597 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 CES1P1Q9UKY3 287 aa7.97□□□□□ -1.13
LIMCH1-209ENST00000509277 TRBV11-1A0A0K0K1C0 115 aa7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 SERTM1A2A2V5 107 aa7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 TOX3O15405 576 aaPredicted RBP7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 FCMRO60667 390 aa7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 UGT2B17O75795 530 aa7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 RLN1P04808 185 aa7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 HBQ1P09105 142 aa7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 LCN1P31025 176 aa7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 TSFMP43897 325 aaKnown RBP7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 GSTM5P46439 218 aa7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 MC2RQ01718 297 aa7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 PDE7AQ13946 482 aa7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 MFSD13AQ14CX5 517 aa7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 RBMS2Q15434 407 aaKnown RBP7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 DUSP5Q16690 384 aa7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 LAMTOR1Q6IAA8 161 aa7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 PTRH1Q86Y79 214 aaKnown RBP7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 MEIOBQ8N635 442 aa7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 ZNF527Q8NB42 609 aa7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 JSRP1Q96MG2 331 aaPredicted RBP7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 KCTD7Q96MP8 289 aa7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 OR10A5Q9H207 317 aa7.96□□□□□ -1.13
LIMCH1-209ENST00000509277 COL6A6A6NMZ7 2263 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 TRABD2BA6NFA1 517 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 FAM74A7A6NL05 159 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 CPSF4LA6NMK7 179 aaKnown RBP7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 MT-ND4P03905 459 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 FOSL1P15407 271 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 F8A1P23610 371 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 PCBP4P57723 403 aaKnown RBP7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 TRA2AQ13595 282 aaKnown RBP eCLIP7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 MELKQ14680 651 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 TOMM20Q15388 145 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 VMACQ2NL98 169 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 FAM74A3Q4VXF1 159 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 KLHL22Q53GT1 634 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 SHQ1Q6PI26 577 aaKnown RBP7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 LRRN1Q6UXK5 716 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 DPP10Q8N608 796 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 C16orf52Q8NHV5 167 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 ZG16BQ96DA0 208 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 FCRL1Q96LA6 429 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 ADOQ96SZ5 270 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 OR10A4Q9H209 315 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 EMC3Q9P0I2 261 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 ZNF69Q9UC07 566 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 ANGPT4Q9Y264 503 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 GSTK1Q9Y2Q3 226 aa7.96□□□□□ -1.14
LIMCH1-209ENST00000509277 SHOXO15266 292 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 RAF1P04049 648 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 KDELR2P33947 212 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 MAGEA2P43356 314 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 STARP49675 285 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 KHKP50053 298 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 NLRC3Q7RTR2 1065 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 OVCH1Q7RTY7 1134 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 SAMD14Q8IZD0 417 aaPredicted RBP7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 OR56A1Q8NGH5 318 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 SLC2A12Q8TD20 617 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 DAZLQ92904 295 aaKnown RBP7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 ZNF681Q96N22 645 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 SFXN2Q96NB2 322 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 ERMAPQ96PL5 475 aaPredicted RBP7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 MNTQ99583 582 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 GSX2Q9BZM3 304 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 CHMP1AQ9HD42 196 aaPredicted RBP7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 PSORS1C1Q9UIG5 152 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 FLVCR2Q9UPI3 526 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 ZNF175Q9Y473 711 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 WDR45Q9Y484 360 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 RAD1O60671 282 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 LRP3O75074 770 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 ANKRD34CP0C6C1 535 aa7.95□□□□□ -1.14
LIMCH1-209ENST00000509277 SLC35E2P0CK97 266 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms