RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 MAGEE2Q8TD90 523 aaPredicted RBP13.83□□□□□ -0.2
CXCL1-202ENST00000509101 UBLCP1Q8WVY7 318 aaPredicted RBP13.83□□□□□ -0.2
CXCL1-202ENST00000509101 CKAP2Q8WWK9 683 aa13.83□□□□□ -0.2
CXCL1-202ENST00000509101 NEURL3Q96EH8 262 aa13.83□□□□□ -0.2
CXCL1-202ENST00000509101 ANKRD27Q96NW4 1050 aa13.83□□□□□ -0.2
CXCL1-202ENST00000509101 SLC38A1Q9H2H9 487 aa13.83□□□□□ -0.2
CXCL1-202ENST00000509101 NARFLQ9H6Q4 476 aa13.83□□□□□ -0.2
CXCL1-202ENST00000509101 LPAR2Q9HBW0 351 aa13.83□□□□□ -0.2
CXCL1-202ENST00000509101 NOP53Q9NZM5 478 aaKnown RBP13.83□□□□□ -0.2
CXCL1-202ENST00000509101 SLC17A7Q9P2U7 560 aa13.83□□□□□ -0.2
CXCL1-202ENST00000509101 MARCOQ9UEW3 520 aaPredicted RBP13.83□□□□□ -0.2
CXCL1-202ENST00000509101 IGHV2OR16-5A0A0B4J2B6 119 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 CFAP73A6NFT4 308 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 AGAP5A6NIR3 686 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 OR6C65A6NJZ3 312 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 B4DSR2 109 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 HMGN4O00479 90 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 FAAHO00519 579 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 FRS3O43559 492 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 CHRM4P08173 479 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 ADRA2AP08913 450 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 UQCRBP14927 111 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 CXCR1P25024 350 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 P2RY4P51582 365 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 MAP2K6P52564 334 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 VSNL1P62760 191 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 EMX2Q04743 252 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 EPS8Q12929 822 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 NPRL3Q12980 569 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 BNIP2Q12982 314 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 MRPL2Q5T653 305 aaKnown RBP13.82□□□□□ -0.2
CXCL1-202ENST00000509101 PRAMEF8Q5VWM4 474 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 PRAMEF7Q5VXH5 474 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 SHQ1Q6PI26 577 aaKnown RBP13.82□□□□□ -0.2
CXCL1-202ENST00000509101 THSD4Q6ZMP0 1018 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 DEF8Q6ZN54 512 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 CREB3L2Q70SY1 520 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 OR8J2Q8NGG1 315 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 ZNF317Q96PQ6 595 aaPredicted RBP13.82□□□□□ -0.2
CXCL1-202ENST00000509101 SLC35A5Q9BS91 424 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 TAPBPLQ9BX59 468 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 PIF1Q9H611 641 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 MKS1Q9NXB0 559 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 ASIC5Q9NY37 505 aa13.82□□□□□ -0.2
CXCL1-202ENST00000509101 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.82□□□□□ -0.2
CXCL1-202ENST00000509101 V9GYY5 206 aaPredicted RBP13.82□□□□□ -0.2
CXCL1-202ENST00000509101 VSTM5A8MXK1 200 aa13.81□□□□□ -0.2
CXCL1-202ENST00000509101 COMPP49747 757 aaPredicted RBP13.81□□□□□ -0.2
CXCL1-202ENST00000509101 SH3BGRP55822 239 aaPredicted RBP13.81□□□□□ -0.2
CXCL1-202ENST00000509101 ROR2Q01974 943 aaKnown RBP13.81□□□□□ -0.2
CXCL1-202ENST00000509101 SNTB2Q13425 540 aaKnown RBP13.81□□□□□ -0.2
CXCL1-202ENST00000509101 KRT80Q6KB66 452 aa13.81□□□□□ -0.2
CXCL1-202ENST00000509101 CADM2Q8N3J6 435 aa13.81□□□□□ -0.2
CXCL1-202ENST00000509101 SGMS2Q8NHU3 365 aa13.81□□□□□ -0.2
CXCL1-202ENST00000509101 ZNF418Q8TF45 676 aaPredicted RBP13.81□□□□□ -0.2
CXCL1-202ENST00000509101 PPP1R36Q96LQ0 422 aa13.81□□□□□ -0.2
CXCL1-202ENST00000509101 DPY30Q9C005 99 aa13.81□□□□□ -0.2
CXCL1-202ENST00000509101 PPCSQ9HAB8 311 aa13.81□□□□□ -0.2
CXCL1-202ENST00000509101 MOV10Q9HCE1 1003 aaKnown RBP13.81□□□□□ -0.2
CXCL1-202ENST00000509101 HIF1ANQ9NWT6 349 aa13.81□□□□□ -0.2
CXCL1-202ENST00000509101 PRSS51A0A1B0GVH4 220 aa13.8□□□□□ -0.2
CXCL1-202ENST00000509101 ZNF503-AS2A6NEH8 195 aa13.8□□□□□ -0.2
CXCL1-202ENST00000509101 FAM157AC9JC47 383 aa13.8□□□□□ -0.2
CXCL1-202ENST00000509101 GKN3PP0CG01 181 aa13.8□□□□□ -0.2
CXCL1-202ENST00000509101 CBR1P16152 277 aa13.8□□□□□ -0.2
CXCL1-202ENST00000509101 IL7RP16871 459 aa13.8□□□□□ -0.2
CXCL1-202ENST00000509101 RPS4Y1P22090 263 aaKnown RBP13.8□□□□□ -0.2
CXCL1-202ENST00000509101 ARF1P84077 181 aaKnown RBP13.8□□□□□ -0.2
CXCL1-202ENST00000509101 SCGB2A2Q13296 93 aa13.8□□□□□ -0.2
CXCL1-202ENST00000509101 DAG1Q14118 895 aa13.8□□□□□ -0.2
CXCL1-202ENST00000509101 GNA13Q14344 377 aa13.8□□□□□ -0.2
CXCL1-202ENST00000509101 PDCD2Q16342 344 aaPredicted RBP13.8□□□□□ -0.2
CXCL1-202ENST00000509101 ANXA8L1Q5VT79 327 aa13.8□□□□□ -0.2
CXCL1-202ENST00000509101 CARM1Q86X55 608 aa13.8□□□□□ -0.2
CXCL1-202ENST00000509101 RNF130Q86XS8 419 aa13.8□□□□□ -0.2
CXCL1-202ENST00000509101 EPHX4Q8IUS5 362 aa13.8□□□□□ -0.2
CXCL1-202ENST00000509101 FAM169BQ8N8A8 192 aa13.8□□□□□ -0.2
CXCL1-202ENST00000509101 CLDND2Q8NHS1 167 aa13.8□□□□□ -0.2
CXCL1-202ENST00000509101 GCDHQ92947 438 aaPredicted RBP13.8□□□□□ -0.2
CXCL1-202ENST00000509101 TMEM186Q96B77 213 aa13.8□□□□□ -0.2
CXCL1-202ENST00000509101 TRNT1Q96Q11 434 aaKnown RBP13.8□□□□□ -0.2
CXCL1-202ENST00000509101 LINC00470Q9BZP3 86 aa13.8□□□□□ -0.2
CXCL1-202ENST00000509101 NOX3Q9HBY0 568 aa13.8□□□□□ -0.2
CXCL1-202ENST00000509101 SPAG7O75391 227 aa13.79□□□□□ -0.2
CXCL1-202ENST00000509101 VAMP5O95183 116 aa13.79□□□□□ -0.2
CXCL1-202ENST00000509101 SAGP10523 405 aaPredicted RBP13.79□□□□□ -0.2
CXCL1-202ENST00000509101 HOXB1P14653 301 aaPredicted RBP13.79□□□□□ -0.2
CXCL1-202ENST00000509101 SERPINB5P36952 375 aa13.79□□□□□ -0.2
CXCL1-202ENST00000509101 GPR6P46095 362 aaPredicted RBP13.79□□□□□ -0.2
CXCL1-202ENST00000509101 CAPZA2P47755 286 aa13.79□□□□□ -0.2
CXCL1-202ENST00000509101 CLDN17P56750 224 aa13.79□□□□□ -0.2
CXCL1-202ENST00000509101 CASP8Q14790 479 aa13.79□□□□□ -0.2
CXCL1-202ENST00000509101 SPANXN4Q5MJ08 99 aa13.79□□□□□ -0.2
CXCL1-202ENST00000509101 C1orf140Q5VVS0 124 aa13.79□□□□□ -0.2
CXCL1-202ENST00000509101 LRRC74BQ6ZQY2 392 aa13.79□□□□□ -0.2
CXCL1-202ENST00000509101 MDP1Q86V88 176 aa13.79□□□□□ -0.2
CXCL1-202ENST00000509101 VPS37AQ8NEZ2 397 aa13.79□□□□□ -0.2
CXCL1-202ENST00000509101 CRLF2Q9HC73 371 aa13.79□□□□□ -0.2
CXCL1-202ENST00000509101 RLIMQ9NVW2 624 aa13.79□□□□□ -0.2
CXCL1-202ENST00000509101 RASD1Q9Y272 281 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms