RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 IRX1P78414 480 aaPredicted RBP13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 SLC25A3Q00325 362 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 IL1RL1Q01638 556 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 EGR4Q05215 589 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 ALG10BQ5I7T1 473 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 NIPAL3Q6P499 406 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 DHRS4L2Q6PKH6 230 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 P2RY8Q86VZ1 359 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 ARMC8Q8IUR7 673 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 SMYD1Q8NB12 490 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 HIPK4Q8NE63 616 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 STK35Q8TDR2 534 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 GTPBP3Q969Y2 492 aaKnown RBP13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 TMEM45BQ96B21 275 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 ZNF607Q96SK3 696 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 PTDSS2Q9BVG9 487 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 SF3B5Q9BWJ5 86 aaKnown RBP13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 SLCO5A1Q9H2Y9 848 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 PIF1Q9H611 641 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 TMEM38AQ9H6F2 299 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 TMEM45AQ9NWC5 275 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 CISD1Q9NZ45 108 aaKnown RBP13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 SLC13A4Q9UKG4 626 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 POU2F3Q9UKI9 436 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 SLC25A15Q9Y619 301 aa13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 NIPBLQ6KC79 2804 aaeCLIP13.01□□□□□ -0.33
UBE2D3-228ENST00000508974 PRORSD1PA6NEY8 169 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 SHISA9B4DS77 424 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 FTCDNL1E5RQL4 147 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 PDLIM1O00151 329 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 DANCRP0C864 163 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 DMTNQ08495 405 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 HIKESHIQ53FT3 197 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 OR7E24Q6IFN5 339 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 SLC22A25Q6T423 547 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 KLHL17Q6TDP4 642 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 TMEM108Q6UXF1 575 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 CLEC9AQ6UXN8 241 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 CREB3L2Q70SY1 520 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 BIVMQ86UB2 503 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 PTOV1Q86YD1 416 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 MFSD8Q8NHS3 518 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 TAAR8Q969N4 342 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 ANKRD27Q96NW4 1050 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 ALKBH3Q96Q83 286 aaPredicted RBP13□□□□□ -0.33
UBE2D3-228ENST00000508974 CGREF1Q99674 301 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 FGFR1OP2Q9NVK5 253 aa13□□□□□ -0.33
UBE2D3-228ENST00000508974 HEATR1Q9H583 2144 aaKnown RBP13□□□□□ -0.33
UBE2D3-228ENST00000508974 IGKV1D-42A0A075B6H8 117 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 M0R082 166 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 M0R3H8 397 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 SERPINB7O75635 380 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 MPGP29372 298 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 CLDN17P56750 224 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 PGGHGQ32M88 737 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 PRSS57Q6UWY2 283 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 EPHX4Q8IUS5 362 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 DPP10Q8N608 796 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 WDR31Q8NA23 367 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 C11orf65Q8NCR3 313 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 VANGL1Q8TAA9 524 aaPredicted RBP12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 ZNF417Q8TAU3 575 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 STON2Q8WXE9 905 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 SLC35B4Q969S0 331 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 MUS81Q96NY9 551 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 ZNF587Q96SQ5 575 aaPredicted RBP12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 SIKE1Q9BRV8 207 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 SLC17A5Q9NRA2 495 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 ZNF701Q9NV72 531 aaPredicted RBP12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 ZNF446Q9NWS9 450 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 SELENONQ9NZV5 590 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 TESQ9UGI8 421 aaKnown RBP12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 RASD1Q9Y272 281 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 GMEB1Q9Y692 573 aa12.99□□□□□ -0.33
UBE2D3-228ENST00000508974 FBP2O00757 339 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 TPST2O60704 377 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 NDUFS7O75251 213 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 MFN2O95140 757 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 VAMP5O95183 116 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 LGI1O95970 557 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 VIMP08670 466 aaKnown RBP12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 TROVE2P10155 538 aaKnown RBP eCLIP12.98□□□□□ -0.332e-9■□□□□ 10
UBE2D3-228ENST00000508974 CD40P25942 277 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 GRPRP30550 384 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 TGFBR3Q03167 851 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 LTBQ06643 244 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 OR1Q1Q15612 314 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 ULK3Q6PHR2 472 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 KLHL24Q6TFL4 600 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 C6orf89Q6UWU4 347 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 LINGO2Q7L985 606 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 RANBP3LQ86VV4 465 aaPredicted RBP12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 C10orf53Q8N6V4 93 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 LSMEM1Q8N8F7 131 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 POMGNT2Q8NAT1 580 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 OR10A6Q8NH74 314 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 DNAJA4Q8WW22 397 aaPredicted RBP12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 SLC38A4Q969I6 547 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 SLC47A1Q96FL8 570 aa12.98□□□□□ -0.33
UBE2D3-228ENST00000508974 RADILQ96JH8 1075 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms