RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 WDR31Q8NA23 367 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 DNAJA3Q96EY1 480 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 C7orf26Q96N11 449 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 LINC00470Q9BZP3 86 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 TMBIM4Q9HC24 238 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 ADPRHL2Q9NX46 363 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 SELENONQ9NZV5 590 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 PCDHB14Q9Y5E9 798 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 USH1CQ9Y6N9 552 aa11.92□□□□□ -0.5
CCHCR1-227ENST00000508852 CR1P17927 2039 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 PRORSD1PA6NEY8 169 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 ELOA3DA6NLF2 546 aaPredicted RBP11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 FRS3O43559 492 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 NPIPB7O75200 414 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 VIMP08670 466 aaKnown RBP11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 ZNF43P17038 809 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 EFNA4P52798 201 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 ELOA3BQ3SY89 546 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 AGBL2Q5U5Z8 902 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 HMBOX1Q6NT76 420 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 PODNL1Q6PEZ8 512 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 C6orf89Q6UWU4 347 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 CREB3L2Q70SY1 520 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 CCDC36Q8IYA8 594 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 LSMEM1Q8N8F7 131 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 ZIC4Q8N9L1 334 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 ELOA3Q8NG57 546 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 OR10H5Q8NGA6 315 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 DNAJA4Q8WW22 397 aaPredicted RBP11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 GTF2H4Q92759 462 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 PROX1Q92786 737 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 C3orf49Q96BT1 292 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 AURKBQ96GD4 344 aaPredicted RBP11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 CCDC28BQ9BUN5 200 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 KATNB1Q9BVA0 655 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 MYOZ1Q9NP98 299 aaPredicted RBP11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 TCF7L2Q9NQB0 619 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 SLC6A13Q9NSD5 602 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 GDF2Q9UK05 429 aaPredicted RBP11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 RCE1Q9Y256 329 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 FKBP7Q9Y680 259 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 GMEB1Q9Y692 573 aa11.91□□□□□ -0.5
CCHCR1-227ENST00000508852 ABCA1O95477 2261 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 ARPC4-TTLL3A0A0A6YYG9 625 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 EVPLLA8MZ36 301 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 TMEM229AB2RXF0 380 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 AIM2O14862 343 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 PDE5AO76074 875 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 CRYAAP02489 173 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 C1QCP02747 245 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 LOXL1Q08397 574 aaPredicted RBP11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 LRIF1Q5T3J3 769 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 C9orf135Q5VTT2 229 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 FAM91A1Q658Y4 838 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 ANKRD16Q6P6B7 361 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 SNX32Q86XE0 403 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 PRIMA1Q86XR5 153 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 CLIP4Q8N3C7 705 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 OR1K1Q8NGR3 316 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 OR6S1Q8NH40 331 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 LRRC8CQ8TDW0 803 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 FAM168AQ92567 244 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 SLC38A4Q969I6 547 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 VPS33AQ96AX1 596 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 ZNF385AQ96PM9 386 aaKnown RBP11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 SLC38A2Q96QD8 506 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 OR52B2Q96RD2 323 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 TNFRSF13CQ96RJ3 184 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 ZNF607Q96SK3 696 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 EPYCQ99645 322 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 PAIP1Q9H074 479 aaKnown RBP11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 RABEP2Q9H5N1 569 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 SLC13A4Q9UKG4 626 aa11.9□□□□□ -0.5
CCHCR1-227ENST00000508852 LOC102725191A0A1B0GVB3 256 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 A0A1W2PR80 420 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 A8MV72 311 aaPredicted RBP11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 RPL36A-HNRNPH2H7BZ11 118 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 NDUFS8O00217 210 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 FZD7O75084 574 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 SLC43A1O75387 559 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 SERPINB7O75635 380 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 F12P00748 615 aaPredicted RBP11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 P2RY4P51582 365 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 NCALDP61601 193 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 SNRPD2P62316 118 aaKnown RBP11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 KRTAP1-1Q07627 177 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 BNIP2Q12982 314 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 GCNT6Q5T4J0 391 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 FAM69AQ5T7M9 428 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 REEP3Q6NUK4 255 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 NIPAL3Q6P499 406 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 ULK3Q6PHR2 472 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 DHRS4L2Q6PKH6 230 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 BLOC1S3Q6QNY0 202 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 SERPINA11Q86U17 422 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 HIPK1Q86Z02 1210 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 ADPRHL1Q8NDY3 354 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 IL17RDQ8NFM7 739 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 OR4F15Q8NGB8 312 aa11.89□□□□□ -0.51
CCHCR1-227ENST00000508852 SPATA3Q8NHX4 192 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms