RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 TSC2P49815 1807 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 LTBP2Q14767 1821 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 TRBV5-4A0A0C4DH59 114 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 A0A0G2JND7 137 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 FAM149AA5PLN7 773 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 LIN7AO14910 233 aaPredicted RBP2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 HDAC3O15379 428 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 GYG2O15488 501 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 B4GAT1O43505 415 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 KERAO60938 352 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 CRCPO75575 148 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 SUPT7LO94864 414 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 SLC25A14O95258 325 aaPredicted RBP2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 TRIM16O95361 564 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 OTCP00480 354 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 IGHV3-13P01766 116 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 SLC4A1P02730 911 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 RPN2P04844 631 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 ANXA5P08758 320 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 HOXD4P09016 255 aaPredicted RBP2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 ALPIP09923 528 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 PIRTP0C851 137 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 UROSP10746 265 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 THRAP10827 490 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 ADRB3P13945 408 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 GFAPP14136 432 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 ATP1B2P14415 290 aaPredicted RBP2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 CD1DP15813 335 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 BGNP21810 368 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 CALB2P22676 271 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 TEAD1P28347 426 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 GDI1P31150 447 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 FCGR2BP31994 310 aaPredicted RBP2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 FCGR2CP31995 323 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 NUDT1P36639 197 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 HSD17B2P37059 387 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 SLC1A3P43003 542 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 STK19P49842 368 aaPredicted RBP2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 TNFSF10P50591 281 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 ATP4BP51164 291 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 AQP5P55064 265 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 CDKN2DP55273 166 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 PKNOX1P55347 436 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 SNU13P55769 128 aaKnown RBP2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 AP1S2P56377 157 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 RPS21P63220 83 aaKnown RBP2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 XIAPP98170 497 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 CDKL1Q00532 357 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 ZNF33BQ06732 778 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 MFGE8Q08431 387 aaPredicted RBP2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 BST1Q10588 318 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 BNIP1Q12981 228 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 LCP2Q13094 533 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 RPA4Q13156 261 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 STX5Q13190 355 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 CEACAM7Q14002 265 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 RCN2Q14257 317 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 MEF2DQ14814 521 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 MAPRE2Q15555 327 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 CHRNA6Q15825 494 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 CST6Q15828 149 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 CDKN3Q16667 212 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 TTC31Q49AM3 519 aaPredicted RBP2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 TMEM52BQ4KMG9 183 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 EOGTQ5NDL2 527 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 C9orf64Q5T6V5 341 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 GPRC6AQ5T6X5 926 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 LRRC66Q68CR7 880 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 SULT1C3Q6IMI6 304 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 C6orf89Q6UWU4 347 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 VITQ6UXI7 678 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 FAM151BQ6UXP7 276 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 CDHR3Q6ZTQ4 885 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 LPCAT2Q7L5N7 544 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 CMC1Q7Z7K0 106 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 ASPGQ86U10 573 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 SERPINA9Q86WD7 417 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 C10orf107Q8IVU9 208 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 CENPLQ8N0S6 344 aaPredicted RBP2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 CLYBLQ8N0X4 340 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 ABHD12Q8N2K0 398 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 POM121L12Q8N7R1 296 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 CCNYL1Q8N7R7 359 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 GPR26Q8NDV2 337 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 OR13C4Q8NGS5 318 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 OR13C5Q8NGS8 318 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 OR6K2Q8NGY2 324 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 OR6F1Q8NGZ6 308 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 C8orf46Q8TAG6 207 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 SPPL2AQ8TCT8 520 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 WFDC5Q8TCV5 224 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 CXorf40AQ8TE69 158 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 KCTD4Q8WVF5 259 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 SKA2Q8WVK7 121 aaPredicted RBP2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 LIPHQ8WWY8 451 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 BCL2L2Q92843 193 aaPredicted RBP2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 GLYATL1Q969I3 302 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 NABP1Q96AH0 204 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 TMEM159Q96B96 161 aa2.06□□□□□ -2.08
TOPBP1-205ENST00000506779 AP2M1Q96CW1 435 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms