RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 WDR91A4D1P6 747 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 TRPC5OSA6NMA1 111 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 RFXANKO14593 260 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 RGS16O15492 202 aaPredicted RBP18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 TCF21O43680 179 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 TYROBPO43914 113 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 PGRP06401 933 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 ZNF43P17038 809 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 RPS4Y1P22090 263 aaKnown RBP18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 NAAAQ02083 359 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 NIPAL3Q6P499 406 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 VHLLQ6RSH7 139 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 HMGN2P46Q86SG4 172 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 SNX32Q86XE0 403 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 GPR137CQ8N3F9 429 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 NUP37Q8NFH4 326 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 STK35Q8TDR2 534 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 MSI2Q96DH6 328 aaKnown RBP18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 FOXN4Q96NZ1 517 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 NUF2Q9BZD4 464 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 ZNF442Q9H7R0 627 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 SSU72Q9NP77 194 aaKnown RBP18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 RPS6KB2Q9UBS0 482 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 RCE1Q9Y256 329 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 SPEF1Q9Y4P9 236 aa18.33■□□□□ 0.52
SQSTM1-210ENST00000506042 CDHR4A6H8M9 788 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 BCAS1O75363 584 aaPredicted RBP18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 SLC43A1O75387 559 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 IL6P05231 212 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 CHRM4P08173 479 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 TFPTP0C1Z6 253 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 NPR2P20594 1047 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 ARRB2P32121 409 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 ARR3P36575 388 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 ETV4P43268 484 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 SLC25A3Q00325 362 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 STX3Q13277 289 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 C1DQ13901 141 aaKnown RBP18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 KRT71Q3SY84 523 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 RNF220Q5VTB9 566 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 C1orf140Q5VVS0 124 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 REP15Q6BDI9 236 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 CREB3L2Q70SY1 520 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 CROCCP2Q86T23 111 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 ZNF385AQ96PM9 386 aaKnown RBP18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 ALKBH3Q96Q83 286 aaPredicted RBP18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 PLK3Q9H4B4 646 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 RAD21L1Q9H4I0 556 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 MEAF6Q9HAF1 191 aa18.32■□□□□ 0.52
SQSTM1-210ENST00000506042 YLPM1P49750 1951 aaKnown RBP18.31■□□□□ 0.52
SQSTM1-210ENST00000506042 ZC3H12DA2A288 527 aaKnown RBP18.31■□□□□ 0.52
SQSTM1-210ENST00000506042 OR2T1O43869 369 aa18.31■□□□□ 0.52
SQSTM1-210ENST00000506042 LY6HO94772 140 aa18.31■□□□□ 0.52
SQSTM1-210ENST00000506042 LGI1O95970 557 aa18.31■□□□□ 0.52
SQSTM1-210ENST00000506042 DAOP14920 347 aa18.31■□□□□ 0.52
SQSTM1-210ENST00000506042 CRATP43155 626 aa18.31■□□□□ 0.52
SQSTM1-210ENST00000506042 PDCD4Q53EL6 469 aaKnown RBP18.31■□□□□ 0.52
SQSTM1-210ENST00000506042 MFSD8Q8NHS3 518 aa18.31■□□□□ 0.52
SQSTM1-210ENST00000506042 SLC35B4Q969S0 331 aa18.31■□□□□ 0.52
SQSTM1-210ENST00000506042 PKNOX2Q96KN3 472 aa18.31■□□□□ 0.52
SQSTM1-210ENST00000506042 PRR14Q9BWN1 585 aa18.31■□□□□ 0.52
SQSTM1-210ENST00000506042 CRNNQ9UBG3 495 aaPredicted RBP18.31■□□□□ 0.52
SQSTM1-210ENST00000506042 SLCO1B7G3V0H7 640 aa18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 hCG_2039718K7EN88 272 aa18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 FRS3O43559 492 aa18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 ITM2AO43736 263 aa18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 IL1RL1Q01638 556 aa18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 ROR2Q01974 943 aaKnown RBP18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 ADIPOQQ15848 244 aa18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 MST1LQ2TV78 715 aa18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 TEX29Q8N6K0 151 aa18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 ZIC4Q8N9L1 334 aa18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 LINC01356Q8N9X3 169 aa18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 PIK3C3Q8NEB9 887 aa18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 BCL2L2Q92843 193 aaPredicted RBP18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 TMEM109Q9BVC6 243 aa18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 BPESC1Q9GZL8 116 aa18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 B3GAT2Q9NPZ5 323 aa18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 AIG1Q9NVV5 245 aa18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 SELENONQ9NZV5 590 aa18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 USP22Q9UPT9 525 aa18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 NOX1Q9Y5S8 564 aa18.3■□□□□ 0.52
SQSTM1-210ENST00000506042 A0A0G2JPF8 293 aa18.29■□□□□ 0.52
SQSTM1-210ENST00000506042 HNRNPCL2B2RXH8 293 aa18.29■□□□□ 0.52
SQSTM1-210ENST00000506042 HNRNPCL3B7ZW38 293 aa18.29■□□□□ 0.52
SQSTM1-210ENST00000506042 HNRNPCL1O60812 293 aaKnown RBP18.29■□□□□ 0.52
SQSTM1-210ENST00000506042 ENTPD5O75356 428 aa18.29■□□□□ 0.52
SQSTM1-210ENST00000506042 CECR9P0C854 216 aa18.29■□□□□ 0.52
SQSTM1-210ENST00000506042 HNRNPCL4P0DMR1 293 aa18.29■□□□□ 0.52
SQSTM1-210ENST00000506042 IDO1P14902 403 aa18.29■□□□□ 0.52
SQSTM1-210ENST00000506042 CBR1P16152 277 aa18.29■□□□□ 0.52
SQSTM1-210ENST00000506042 GIFP27352 417 aa18.29■□□□□ 0.52
SQSTM1-210ENST00000506042 APEX1P27695 318 aaKnown RBP18.29■□□□□ 0.52
SQSTM1-210ENST00000506042 LSP1P33241 339 aa18.29■□□□□ 0.52
SQSTM1-210ENST00000506042 CAPZA2P47755 286 aa18.29■□□□□ 0.52
SQSTM1-210ENST00000506042 SELENOPP49908 381 aa18.29■□□□□ 0.52
SQSTM1-210ENST00000506042 DSTNP60981 165 aa18.29■□□□□ 0.52
SQSTM1-210ENST00000506042 CR1LQ2VPA4 569 aa18.29■□□□□ 0.52
SQSTM1-210ENST00000506042 SPATA21Q7Z572 469 aa18.29■□□□□ 0.52
SQSTM1-210ENST00000506042 ARIH2OSQ8N7S6 290 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms