RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 RP2O75695 350 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 NCR1O76036 304 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 ECHS1P30084 290 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 EVX1P49640 407 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 SEC24CP53992 1094 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 TMEM33P57088 247 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 KCNJ10P78508 379 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 MYBPC1Q00872 1141 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 ROR2Q01974 943 aaKnown RBP13.4□□□□□ -0.26
HDAC6-236ENST00000498808 OR7A5Q15622 319 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 KANK2Q63ZY3 851 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 NIPAL3Q6P499 406 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 CREB3L2Q70SY1 520 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 NATD1Q8N6N6 113 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 RNF217Q8TC41 542 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 MZB1Q8WU39 189 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 C22orf15Q8WYQ4 148 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 SLC35G5Q96KT7 338 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 OR51I1Q9H343 314 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 SLC52A3Q9NQ40 469 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 DDX28Q9NUL7 540 aaKnown RBP13.4□□□□□ -0.26
HDAC6-236ENST00000498808 DCDC2Q9UHG0 476 aa13.4□□□□□ -0.26
HDAC6-236ENST00000498808 RNF103-CHMP3A0A140T963 221 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 TMEM233B4DJY2 109 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 PLPP2O43688 288 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 MPZL1O95297 269 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 GPIP06744 558 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 GUSBP08236 651 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 OR12D1P0DN82 309 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 NR4A1P22736 598 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 ZFP36P26651 326 aaKnown RBP13.39□□□□□ -0.27
HDAC6-236ENST00000498808 ARR3P36575 388 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 ALDH3B1P43353 468 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 SH3BGRP55822 239 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-236ENST00000498808 ARF1P84077 181 aaKnown RBP13.39□□□□□ -0.27
HDAC6-236ENST00000498808 MAD2L1BPQ15013 274 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-236ENST00000498808 MDP1Q86V88 176 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 EPHX4Q8IUS5 362 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 CLECL1Q8IZS7 167 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 MIPOL1Q8TD10 442 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 RAB8BQ92930 207 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 SYT3Q9BQG1 590 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 C1QTNF5Q9BXJ0 243 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 LINC00470Q9BZP3 86 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 TSPYL1Q9H0U9 437 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 MS4A5Q9H3V2 200 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 UNKLQ9H9P5 680 aaKnown RBP13.39□□□□□ -0.27
HDAC6-236ENST00000498808 CRLF2Q9HC73 371 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 POLE3Q9NRF9 147 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 EXD2Q9NVH0 621 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 OXSMQ9NWU1 459 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 ARMCX1Q9P291 453 aa13.39□□□□□ -0.27
HDAC6-236ENST00000498808 A0A0G2JMP0 313 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 A0A0X1KG70 313 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 PIP5K1BO14986 540 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 PLIN3O60664 434 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 GLRA3O75311 464 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 FSHBP01225 129 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 GSNP06396 782 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 MAP2K6P52564 334 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 ZNF311Q5JNZ3 666 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 TMEM225Q6GV28 225 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 ACSM5Q6NUN0 579 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 RIMKLAQ8IXN7 391 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 DDIASQ8IXT1 998 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 OR4M2Q8NGB6 313 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 NANPQ8TBE9 248 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 TWIST2Q8WVJ9 160 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 XAGE5Q8WWM1 108 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 ROPN1LQ96C74 230 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 C1orf50Q9BV19 199 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 DUSP26Q9BV47 211 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 ZNF665Q9H7R5 613 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-236ENST00000498808 MYEF2Q9P2K5 600 aaKnown RBP13.38□□□□□ -0.27
HDAC6-236ENST00000498808 PYCARDQ9ULZ3 195 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 CORINQ9Y5Q5 1042 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 ARHGAP32A7KAX9 2087 aa13.38□□□□□ -0.27
HDAC6-236ENST00000498808 A0A1W2PPM1 405 aa13.37□□□□□ -0.27
HDAC6-236ENST00000498808 PRAMEF27A3QJZ7 478 aa13.37□□□□□ -0.27
HDAC6-236ENST00000498808 RPL36A-HNRNPH2H7BZ11 118 aa13.37□□□□□ -0.27
HDAC6-236ENST00000498808 PEX11AO75192 247 aa13.37□□□□□ -0.27
HDAC6-236ENST00000498808 DEAF1O75398 565 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-236ENST00000498808 LYPLA1O75608 230 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-236ENST00000498808 PRSS23O95084 383 aa13.37□□□□□ -0.27
HDAC6-236ENST00000498808 CHEK2O96017 543 aa13.37□□□□□ -0.27
HDAC6-236ENST00000498808 ABHD2P08910 425 aa13.37□□□□□ -0.27
HDAC6-236ENST00000498808 ANPEPP15144 967 aa13.37□□□□□ -0.27
HDAC6-236ENST00000498808 MAPK1P28482 360 aa13.37□□□□□ -0.27
HDAC6-236ENST00000498808 MRPS11P82912 194 aaKnown RBP13.37□□□□□ -0.27
HDAC6-236ENST00000498808 ZP4Q12836 540 aa13.37□□□□□ -0.27
HDAC6-236ENST00000498808 TUSC1Q2TAM9 212 aa13.37□□□□□ -0.27
HDAC6-236ENST00000498808 UGT3A2Q3SY77 523 aa13.37□□□□□ -0.27
HDAC6-236ENST00000498808 TNFAIP8L2Q6P589 184 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-236ENST00000498808 LRP11Q86VZ4 500 aa13.37□□□□□ -0.27
HDAC6-236ENST00000498808 IL17RDQ8NFM7 739 aa13.37□□□□□ -0.27
HDAC6-236ENST00000498808 DVL3Q92997 716 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-236ENST00000498808 LRRC58Q96CX6 371 aa13.37□□□□□ -0.27
HDAC6-236ENST00000498808 ZNF837Q96EG3 531 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-236ENST00000498808 MS4A3Q96HJ5 214 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms