RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 LINC00271P0C7V0 271 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 GNG2P59768 71 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 SIRPAP78324 504 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 FCRL6Q6DN72 434 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 OR5M1Q8NGP8 315 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 OR52I2Q8NH67 350 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 C16orf52Q8NHV5 167 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 CREB3L1Q96BA8 519 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 MOAP1Q96BY2 351 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 MNTQ99583 582 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 LIN7BQ9HAP6 207 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 FOLH1BQ9HBA9 442 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 RXFP3Q9NSD7 469 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 C14orf105Q9NVL8 296 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 C2orf42Q9NWW7 574 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 CES1P1Q9UKY3 287 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 SLC17A4Q9Y2C5 497 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 SLC22A7Q9Y694 548 aa12.36□□□□□ -0.43
GPC1-209ENST00000495100 RNH1P13489 461 aaKnown RBP12.35□□□□□ -0.43
GPC1-209ENST00000495100 HLA-DMAP28067 261 aa12.35□□□□□ -0.43
GPC1-209ENST00000495100 DCTDP32321 178 aa12.35□□□□□ -0.43
GPC1-209ENST00000495100 AGFG1P52594 562 aaKnown RBP12.35□□□□□ -0.43
GPC1-209ENST00000495100 ZNF136P52737 540 aa12.35□□□□□ -0.43
GPC1-209ENST00000495100 ALG10Q5BKT4 473 aa12.35□□□□□ -0.43
GPC1-209ENST00000495100 CORO6Q6QEF8 472 aa12.35□□□□□ -0.43
GPC1-209ENST00000495100 ALKAL2Q6UX46 152 aa12.35□□□□□ -0.43
GPC1-209ENST00000495100 OR51D1Q8NGF3 324 aa12.35□□□□□ -0.43
GPC1-209ENST00000495100 DDOQ99489 341 aa12.35□□□□□ -0.43
GPC1-209ENST00000495100 COPS3Q9UNS2 423 aa12.35□□□□□ -0.43
GPC1-209ENST00000495100 OR6C68A6NDL8 312 aa12.35□□□□□ -0.43
GPC1-209ENST00000495100 ARL6IP5O75915 188 aa12.35□□□□□ -0.43
GPC1-209ENST00000495100 NGFRP08138 427 aa12.35□□□□□ -0.43
GPC1-209ENST00000495100 ASAH1Q13510 395 aa12.35□□□□□ -0.43
GPC1-209ENST00000495100 SF3A2Q15428 464 aaKnown RBP12.35□□□□□ -0.43
GPC1-209ENST00000495100 GLYR1Q49A26 553 aaPredicted RBP12.35□□□□□ -0.43
GPC1-209ENST00000495100 MARCH3Q86UD3 253 aa12.35□□□□□ -0.43
GPC1-209ENST00000495100 ALG12Q9BV10 488 aa12.35□□□□□ -0.43
GPC1-209ENST00000495100 FBXL21Q9UKT6 434 aa12.35□□□□□ -0.43
GPC1-209ENST00000495100 SLC22A13Q9Y226 551 aa12.35□□□□□ -0.43
GPC1-209ENST00000495100 SIGLEC7Q9Y286 467 aa12.35□□□□□ -0.43
GPC1-209ENST00000495100 SIGLEC5O15389 551 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 PLATP00750 562 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 TMIGD3P0DMS9 266 aaPredicted RBP12.34□□□□□ -0.43
GPC1-209ENST00000495100 SLC2A1P11166 492 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 ATF4P18848 351 aaPredicted RBP12.34□□□□□ -0.43
GPC1-209ENST00000495100 PRKXP51817 358 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 GUCA2AQ02747 115 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 SPOCK1Q08629 439 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 SIGLEC14Q08ET2 396 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 HBMQ6B0K9 141 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 MDGA2Q7Z553 956 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 PM20D2Q8IYS1 436 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 SAMD14Q8IZD0 417 aaPredicted RBP12.34□□□□□ -0.43
GPC1-209ENST00000495100 LRRC20Q8TCA0 184 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 TMEM106AQ96A25 262 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 ELMOD3Q96FG2 381 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 MOGAT1Q96PD6 335 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 CMKLR1Q99788 373 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 MESP1Q9BRJ9 268 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 EMC6Q9BV81 110 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 SPEF1Q9Y4P9 236 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 PHF3Q92576 2039 aaKnown RBP12.34□□□□□ -0.43
GPC1-209ENST00000495100 GMDSO60547 372 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 SLC16A7O60669 478 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 TFP02787 698 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 WNT1P04628 370 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 GARNL3Q5VVW2 1013 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 TSTD1Q8NFU3 115 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 SETD6Q8TBK2 473 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 ATG5Q9H1Y0 275 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 WDR76Q9H967 626 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 POLMQ9NP87 494 aaPredicted RBP12.34□□□□□ -0.43
GPC1-209ENST00000495100 CGGBP1Q9UFW8 167 aaPredicted RBP12.34□□□□□ -0.43
GPC1-209ENST00000495100 C19orf53Q9UNZ5 99 aaPredicted RBP12.34□□□□□ -0.43
GPC1-209ENST00000495100 A3GALT2U3KPV4 340 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 MTCL1Q9Y4B5 1905 aaKnown RBP12.34□□□□□ -0.43
GPC1-209ENST00000495100 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 TMEM150CB9EJG8 249 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 G3V3Y1 287 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 AGR2O95994 175 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 ANXA3P12429 323 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 GTF2F2P13984 249 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 ERP29P30040 261 aaKnown RBP12.34□□□□□ -0.43
GPC1-209ENST00000495100 PSMA6P60900 246 aaKnown RBP12.34□□□□□ -0.43
GPC1-209ENST00000495100 TRA2BP62995 288 aaKnown RBP12.34□□□□□ -0.43
GPC1-209ENST00000495100 GALK2Q01415 458 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 KIR2DS3Q14952 304 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 PCGF3Q3KNV8 242 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 LIPNQ5VXI9 398 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 B3GNTL1Q67FW5 361 aaPredicted RBP12.34□□□□□ -0.43
GPC1-209ENST00000495100 CD163Q86VB7 1156 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.34□□□□□ -0.43
GPC1-209ENST00000495100 OR51A4Q8NGJ6 313 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 SFXN5Q8TD22 340 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 GIMAP5Q96F15 307 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 PELI1Q96FA3 418 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 MS4A3Q96HJ5 214 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 KLHDC3Q9BQ90 382 aa12.34□□□□□ -0.43
GPC1-209ENST00000495100 TRABD2BA6NFA1 517 aa12.33□□□□□ -0.43
GPC1-209ENST00000495100 OIP5O43482 229 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms