RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 MPGP29372 298 aa13.7□□□□□ -0.22
LIMS2-216ENST00000494613 ATP5J2P56134 94 aa13.7□□□□□ -0.22
LIMS2-216ENST00000494613 TGFBR3Q03167 851 aa13.7□□□□□ -0.22
LIMS2-216ENST00000494613 DMTNQ08495 405 aa13.7□□□□□ -0.22
LIMS2-216ENST00000494613 SELPLGQ14242 412 aa13.7□□□□□ -0.22
LIMS2-216ENST00000494613 PGGHGQ32M88 737 aa13.7□□□□□ -0.22
LIMS2-216ENST00000494613 ULK3Q6PHR2 472 aa13.7□□□□□ -0.22
LIMS2-216ENST00000494613 C6orf89Q6UWU4 347 aa13.7□□□□□ -0.22
LIMS2-216ENST00000494613 DHDDSQ86SQ9 333 aa13.7□□□□□ -0.22
LIMS2-216ENST00000494613 ARMC8Q8IUR7 673 aa13.7□□□□□ -0.22
LIMS2-216ENST00000494613 POMGNT2Q8NAT1 580 aa13.7□□□□□ -0.22
LIMS2-216ENST00000494613 SLC38A4Q969I6 547 aa13.7□□□□□ -0.22
LIMS2-216ENST00000494613 SIKE1Q9BRV8 207 aa13.7□□□□□ -0.22
LIMS2-216ENST00000494613 AMBRA1Q9C0C7 1298 aa13.7□□□□□ -0.22
LIMS2-216ENST00000494613 TMEM27Q9HBJ8 222 aa13.7□□□□□ -0.22
LIMS2-216ENST00000494613 CADP27708 2225 aa13.7□□□□□ -0.22
LIMS2-216ENST00000494613 ZFHX3Q15911 3703 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 NF1P21359 2839 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 H7C1Q1 480 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 OR2T1O43869 369 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 PNMTP11086 282 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 CDH2P19022 906 aaPredicted RBP13.69□□□□□ -0.22
LIMS2-216ENST00000494613 PTAFRP25105 342 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 SELENOPP49908 381 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 MTPNP58546 118 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 RPS4XP62701 263 aaKnown RBP13.69□□□□□ -0.22
LIMS2-216ENST00000494613 RBBP4Q09028 425 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 NFYCQ13952 458 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 OR1Q1Q15612 314 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 DUSP7Q16829 419 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 ALG10BQ5I7T1 473 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 KLHL17Q6TDP4 642 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 TMEM108Q6UXF1 575 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 Q71RC1 249 aaPredicted RBP13.69□□□□□ -0.22
LIMS2-216ENST00000494613 NET1Q7Z628 596 aaPredicted RBP13.69□□□□□ -0.22
LIMS2-216ENST00000494613 SMYD1Q8NB12 490 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 C11orf65Q8NCR3 313 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 BHLHE22Q8NFJ8 381 aaPredicted RBP13.69□□□□□ -0.22
LIMS2-216ENST00000494613 SLC47A1Q96FL8 570 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 RADILQ96JH8 1075 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 OXGR1Q96P68 337 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 TMEM120AQ9BXJ8 343 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 SLCO5A1Q9H2Y9 848 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 KAT8Q9H7Z6 458 aaKnown RBP13.69□□□□□ -0.22
LIMS2-216ENST00000494613 SLC17A5Q9NRA2 495 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 ZNF446Q9NWS9 450 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 MGAT4BQ9UQ53 548 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 USF3Q68DE3 2245 aa13.69□□□□□ -0.22
LIMS2-216ENST00000494613 FLNAP21333 2647 aaKnown RBP13.69□□□□□ -0.22
LIMS2-216ENST00000494613 IGKV1D-42A0A075B6H8 117 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 A0A087WUJ7 227 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 TRIM64A6NGJ6 449 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 TRIM64BA6NI03 449 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 MS4A18H0YCH9 400 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 M0R1B8 84 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 FBP2O00757 339 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 KRT33AO76009 404 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 LGI1O95970 557 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 CBLP22681 906 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 CD40P25942 277 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 PCBP3P57721 371 aaKnown RBP13.68□□□□□ -0.22
LIMS2-216ENST00000494613 LGALS3BPQ08380 585 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 SF3A3Q12874 501 aaKnown RBP eCLIP13.68□□□□□ -0.22
LIMS2-216ENST00000494613 MS4A18Q3C1V0 323 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 FAM91A1Q658Y4 838 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 NIPAL3Q6P499 406 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 H1FNTQ75WM6 255 aaPredicted RBP13.68□□□□□ -0.22
LIMS2-216ENST00000494613 PIAS4Q8N2W9 510 aaPredicted RBP13.68□□□□□ -0.22
LIMS2-216ENST00000494613 C1orf162Q8NEQ5 155 aaPredicted RBP13.68□□□□□ -0.22
LIMS2-216ENST00000494613 RNF217Q8TC41 542 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 TRMT61AQ96FX7 289 aaKnown RBP13.68□□□□□ -0.22
LIMS2-216ENST00000494613 BOD1Q96IK1 185 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 SEC14L4Q9UDX3 406 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 SLC13A4Q9UKG4 626 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 ANGPT4Q9Y264 503 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 MAGED1Q9Y5V3 778 aaPredicted RBP13.68□□□□□ -0.22
LIMS2-216ENST00000494613 C2CD3Q4AC94 2353 aa13.68□□□□□ -0.22
LIMS2-216ENST00000494613 TRAV36DV7A0A075B6V5 113 aa13.67□□□□□ -0.22
LIMS2-216ENST00000494613 E7EQL1 145 aa13.67□□□□□ -0.22
LIMS2-216ENST00000494613 SMAD7O15105 426 aaKnown RBP13.67□□□□□ -0.22
LIMS2-216ENST00000494613 LY6G6DO95868 133 aa13.67□□□□□ -0.22
LIMS2-216ENST00000494613 C8BP07358 591 aa13.67□□□□□ -0.22
LIMS2-216ENST00000494613 ZNF43P17038 809 aa13.67□□□□□ -0.22
LIMS2-216ENST00000494613 HOXB4P17483 251 aaPredicted RBP13.67□□□□□ -0.22
LIMS2-216ENST00000494613 PTNP21246 168 aa13.67□□□□□ -0.22
LIMS2-216ENST00000494613 GZMMP51124 257 aa13.67□□□□□ -0.22
LIMS2-216ENST00000494613 CDH12P55289 794 aa13.67□□□□□ -0.22
LIMS2-216ENST00000494613 CLDN17P56750 224 aa13.67□□□□□ -0.22
LIMS2-216ENST00000494613 RGS8P57771 180 aaPredicted RBP13.67□□□□□ -0.22
LIMS2-216ENST00000494613 PRPS1P60891 318 aa13.67□□□□□ -0.22
LIMS2-216ENST00000494613 LTBQ06643 244 aa13.67□□□□□ -0.22
LIMS2-216ENST00000494613 CYLC2Q14093 348 aaPredicted RBP13.67□□□□□ -0.22
LIMS2-216ENST00000494613 CYP51A1Q16850 503 aa13.67□□□□□ -0.22
LIMS2-216ENST00000494613 FAM69AQ5T7M9 428 aa13.67□□□□□ -0.22
LIMS2-216ENST00000494613 NANOGP8Q6NSW7 305 aa13.67□□□□□ -0.22
LIMS2-216ENST00000494613 SLC22A25Q6T423 547 aa13.67□□□□□ -0.22
LIMS2-216ENST00000494613 C5orf46Q6UWT4 87 aa13.67□□□□□ -0.22
LIMS2-216ENST00000494613 CLEC9AQ6UXN8 241 aa13.67□□□□□ -0.22
LIMS2-216ENST00000494613 ABHD12BQ7Z5M8 362 aaPredicted RBP13.67□□□□□ -0.22
LIMS2-216ENST00000494613 C17orf78Q8N4C9 275 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms