RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 ASCL1P50553 236 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 TRIM25Q14258 630 aaKnown RBP10.32□□□□□ -0.76
CTSA-209ENST00000493522 MTX3Q5HYI7 312 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 TMEM201Q5SNT2 666 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 OTUD3Q5T2D3 398 aaPredicted RBP10.32□□□□□ -0.76
CTSA-209ENST00000493522 FAM69AQ5T7M9 428 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 LCN8Q6JVE9 175 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 TTC33Q6PID6 262 aaPredicted RBP10.32□□□□□ -0.76
CTSA-209ENST00000493522 CCDC121Q6ZUS5 278 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 FAM214BQ7L5A3 538 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 CYP4Z1Q86W10 505 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 DHFR2Q86XF0 187 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 OFCC1Q8IZS5 231 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 SLC43A2Q8N370 569 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 ASB9Q96DX5 294 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 MPP4Q96JB8 637 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 LRGUKQ96M69 825 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 TMEM43Q9BTV4 400 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 PTDSS2Q9BVG9 487 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 FNDC11Q9BVV2 318 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 TRIM15Q9C019 465 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 C12orf49Q9H741 205 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 GLRX2Q9NS18 164 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 EMC3Q9P0I2 261 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 KLHL13Q9P2N7 655 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 RHCGQ9UBD6 479 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 ZNF629Q9UEG4 869 aaPredicted RBP10.32□□□□□ -0.76
CTSA-209ENST00000493522 RIMS3Q9UJD0 308 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 A4GNTQ9UNA3 340 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 PROCRQ9UNN8 238 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 ENPP4Q9Y6X5 453 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 NAV3Q8IVL0 2385 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 ANKHD1Q8IWZ3 2542 aaKnown RBP10.31□□□□□ -0.76
CTSA-209ENST00000493522 ABCA2Q9BZC7 2435 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 FAM221AA4D161 298 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 EBAG9O00559 213 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 OR2T1O43869 369 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 RAMP1O60894 148 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 THRBP10828 461 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 CBLP22681 906 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 GRPRP30550 384 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 KIR2DL2P43627 348 aaPredicted RBP10.31□□□□□ -0.76
CTSA-209ENST00000493522 ST3GAL3Q11203 375 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 GUSBP1Q15486 140 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 EEF1A1P5Q5VTE0 462 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 PAQR6Q6TCH4 344 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 LUZP2Q86TE4 346 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 CCDC103Q8IW40 242 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 TUSC5Q8IXB3 177 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 TMEM99Q8N816 258 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 OR6K3Q8NGY3 331 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 MFSD8Q8NHS3 518 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 NINJ1Q92982 152 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 TAAR8Q969N4 342 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 LRRC46Q96FV0 321 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 PYURFQ96I23 114 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 ZNF300Q96RE9 604 aaPredicted RBP10.31□□□□□ -0.76
CTSA-209ENST00000493522 PSD2Q9BQI7 771 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 PRSS27Q9BQR3 290 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 TACO1Q9BSH4 297 aaKnown RBP10.31□□□□□ -0.76
CTSA-209ENST00000493522 TMUB1Q9BVT8 246 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 PIGMQ9H3S5 423 aa10.31□□□□□ -0.76
CTSA-209ENST00000493522 FAM32AQ9Y421 112 aaKnown RBP10.31□□□□□ -0.76
CTSA-209ENST00000493522 AQP7P3A6NL99 342 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 ZNF716A6NP11 495 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 FTCDNL1E5RQL4 147 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 M0R082 166 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 PIP5K1CO60331 668 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 BGLAPP02818 100 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 FABP3P05413 133 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 NQO1P15559 274 aaKnown RBP10.3□□□□□ -0.76
CTSA-209ENST00000493522 UQCRC1P31930 480 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 RBM34P42696 430 aaKnown RBP10.3□□□□□ -0.76
CTSA-209ENST00000493522 IST1P53990 364 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 UGT2B15P54855 530 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 VLDLRP98155 873 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 MS4A2Q01362 244 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 IL1RL1Q01638 556 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 FLOT2Q14254 428 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 MFSD13AQ14CX5 517 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 TRAM2Q15035 370 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 LINC00114Q6XXX2 140 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 BTLAQ7Z6A9 289 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 GPAT4Q86UL3 456 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 NKAIN4Q8IVV8 208 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 ZNF417Q8TAU3 575 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 TMEM255BQ8WV15 326 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 STARD4Q96DR4 205 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 ZNF587Q96SQ5 575 aaPredicted RBP10.3□□□□□ -0.76
CTSA-209ENST00000493522 SEPHS2Q99611 448 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 FOXC2Q99958 501 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 ZNF426Q9BUY5 554 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 ASPNQ9BXN1 380 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 CADM1Q9BY67 442 aaKnown RBP10.3□□□□□ -0.76
CTSA-209ENST00000493522 OPN3Q9H1Y3 402 aaPredicted RBP10.3□□□□□ -0.76
CTSA-209ENST00000493522 LRMDAQ9H2I8 198 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 BCO1Q9HAY6 547 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 GP6Q9HCN6 339 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 SEC14L4Q9UDX3 406 aa10.3□□□□□ -0.76
CTSA-209ENST00000493522 TCRBV5S2A0A599 114 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms