RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 UTS2O95399 124 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 FAM157BP0CG42 384 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 PRKAR1AP10644 381 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 RAB3BP20337 219 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 F8A1P23610 371 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 EVI2BP34910 448 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 FASLGP48023 281 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 SLC37A1P57057 533 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 RPS11P62280 158 aaKnown RBP eCLIP11.36□□□□□ -0.59
HMGN1-220ENST00000492280 CFHR1Q03591 330 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 PON3Q15166 354 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 SYT13Q7L8C5 426 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 YIPF7Q8N8F6 280 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 OR6C4Q8NGE1 309 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 COQ7Q99807 217 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 ABCG5Q9H222 651 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 POLE3Q9NRF9 147 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 CUTCQ9NTM9 273 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 NCDNQ9UBB6 729 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 PLCL2Q9UPR0 1127 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 CENPXA8MT69 81 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 HCRTR2O43614 444 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 SCO2O43819 266 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 OR7A10O76100 309 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 UBL4AP11441 157 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 BCKDHBP21953 392 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 ITPKBP27987 946 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 CTXN1P60606 82 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 IGLV3-21P80748 117 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-220ENST00000492280 BDH1Q02338 343 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 SKP2Q13309 424 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 HYAL4Q2M3T9 481 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 COL13A1Q5TAT6 717 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-220ENST00000492280 LRRC69Q6ZNQ3 347 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 MARCH3Q86UD3 253 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 GPALPP1Q8IXQ4 340 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 DNAAF1Q8NEP3 725 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 LGALS14Q8TCE9 139 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 PIGKQ92643 395 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 THAP7Q9BT49 309 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-220ENST00000492280 NOX4Q9NPH5 578 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 NANSQ9NR45 359 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 GMEB2Q9UKD1 530 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 SLC6A5Q9Y345 797 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 A0A1W2PR77 199 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 HMX3A6NHT5 357 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 RHPN2P1A8MT19 583 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 DOK2O60496 412 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 FZD7O75084 574 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 SC5DO75845 299 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 IGLV3-19P01714 112 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 FCER2P06734 321 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 TALDO1P37837 337 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 RBM34P42696 430 aaKnown RBP11.35□□□□□ -0.59
HMGN1-220ENST00000492280 GPR143P51810 404 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 NR0B1P51843 470 aaKnown RBP11.35□□□□□ -0.59
HMGN1-220ENST00000492280 BCL2L15Q5TBC7 163 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 OR1L3Q8NH93 324 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 RGP1Q92546 391 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-220ENST00000492280 TRIM63Q969Q1 353 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 SLC25A36Q96CQ1 311 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 SMIM19Q96E16 107 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 TMEM246Q9BRR3 403 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 ALG12Q9BV10 488 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 SERTAD3Q9UJW9 196 aa11.35□□□□□ -0.59
HMGN1-220ENST00000492280 ZNF749O43361 778 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 FOLR1P15328 257 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 TACR3P29371 465 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 CCR6P51684 374 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 SIRPAP78324 504 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 ZNF117Q03924 483 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 GRM7Q14831 915 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 KLHL26Q53HC5 615 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 CHRDL2Q6WN34 429 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 PXKQ7Z7A4 578 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 GKN2Q86XP6 184 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 OR10AC1Q8NH08 325 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 SLC2A12Q8TD20 617 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 ATOH1Q92858 354 aaPredicted RBP11.34□□□□□ -0.59
HMGN1-220ENST00000492280 KIAA1143Q96AT1 154 aaPredicted RBP11.34□□□□□ -0.59
HMGN1-220ENST00000492280 LPAR4Q99677 370 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 NPAS1Q99742 590 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 NUDT9Q9BW91 350 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 ULBP3Q9BZM4 244 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 NRIP3Q9NQ35 241 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 CYSLTR2Q9NS75 346 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 FBXL21Q9UKT6 434 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 TLCD2A6NGC4 264 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 SCDO00767 359 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 PIN1P1O15428 100 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 SEC14L5O43304 696 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 MBTPS2O43462 519 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 ARSBP15848 533 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 CSF2RBP32927 897 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 NRG3P56975 720 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 RPL18Q07020 188 aaKnown RBP11.34□□□□□ -0.59
HMGN1-220ENST00000492280 ZNF74Q16587 644 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 ALG10Q5BKT4 473 aa11.34□□□□□ -0.59
HMGN1-220ENST00000492280 LRRC28Q86X40 367 aaPredicted RBP11.34□□□□□ -0.59
HMGN1-220ENST00000492280 C9orf40Q8IXQ3 194 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms