RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 S1PR1P21453 382 aa10.46□□□□□ -0.74
CRNKL1-204ENST00000490910 ATP5A1P25705 553 aaKnown RBP10.46□□□□□ -0.74
CRNKL1-204ENST00000490910 CAP1Q01518 475 aa10.46□□□□□ -0.74
CRNKL1-204ENST00000490910 ID2Q02363 134 aa10.46□□□□□ -0.74
CRNKL1-204ENST00000490910 EIF2B1Q14232 305 aaKnown RBP10.46□□□□□ -0.74
CRNKL1-204ENST00000490910 SLC29A4Q7RTT9 530 aa10.46□□□□□ -0.74
CRNKL1-204ENST00000490910 LRRTM1Q86UE6 522 aa10.46□□□□□ -0.74
CRNKL1-204ENST00000490910 LRRTM4Q86VH4 590 aa10.46□□□□□ -0.74
CRNKL1-204ENST00000490910 RNF113BQ8IZP6 322 aaKnown RBP10.46□□□□□ -0.74
CRNKL1-204ENST00000490910 LRRC25Q8N386 305 aaPredicted RBP10.46□□□□□ -0.74
CRNKL1-204ENST00000490910 OR4C16Q8NGL9 310 aa10.46□□□□□ -0.74
CRNKL1-204ENST00000490910 OR9A2Q8NGT5 310 aa10.46□□□□□ -0.74
CRNKL1-204ENST00000490910 SFXN5Q8TD22 340 aa10.46□□□□□ -0.74
CRNKL1-204ENST00000490910 TM4SF18Q96CE8 201 aa10.46□□□□□ -0.74
CRNKL1-204ENST00000490910 MYEOVQ96EZ4 313 aa10.46□□□□□ -0.74
CRNKL1-204ENST00000490910 TMPRSS13Q9BYE2 586 aa10.46□□□□□ -0.74
CRNKL1-204ENST00000490910 DPEP2Q9H4A9 486 aa10.46□□□□□ -0.74
CRNKL1-204ENST00000490910 FZD3Q9NPG1 666 aa10.46□□□□□ -0.74
CRNKL1-204ENST00000490910 IL36AQ9UHA7 158 aa10.46□□□□□ -0.74
CRNKL1-204ENST00000490910 TSPAN11A1L157 253 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 TMEM200CA6NKL6 621 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 ZNF878C9JN71 531 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 OR2T1O43869 369 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 KAT7O95251 611 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 IGF2P01344 180 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 ASGR2P07307 311 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 RPA2P15927 270 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 SDHAP31040 664 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 IRF5Q13568 498 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 ITPRIPL2Q3MIP1 535 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 HLA-DQA1Q5Y7H0 255 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 LCTLQ6UWM7 567 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 CD300LDQ6UXZ3 194 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 KLHDC8AQ8IYD2 350 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 OR51D1Q8NGF3 324 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 FAM46BQ96A09 425 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 SGK3Q96BR1 496 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 ZNF559Q9BR84 538 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 PTDSS2Q9BVG9 487 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 GLIPR2Q9H4G4 154 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 PELI2Q9HAT8 420 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 CENPMQ9NSP4 180 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 ZNF443Q9Y2A4 671 aaPredicted RBP10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 TRBV5-4A0A0C4DH59 114 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 TVP23AA6NH52 213 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 PPP1R2P9O14990 202 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 FGF2P09038 288 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 OR8G3PP0DMU2 310 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 NPPBP16860 134 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 C3orf33Q6P1S2 294 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 KCTD18Q6PI47 426 aaPredicted RBP10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 KCNRGQ8N5I3 272 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 OR10G6Q8NH81 332 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 SLC2A12Q8TD20 617 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 SMIM19Q96E16 107 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 OR1F2PQ96R84 312 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 PITHD1Q9GZP4 211 aaPredicted RBP10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 TOLLIPQ9H0E2 274 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 TCEAL2Q9H3H9 227 aaPredicted RBP10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 PHIPQ8WWQ0 1821 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 SHANK3Q9BYB0 1731 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 TBC1D3KA0A087X1G2 549 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 DCDC2BA2VCK2 349 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 TBC1D3BA6NDS4 549 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 TBC1D3FA6NER0 549 aaPredicted RBP10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 GRXCR1A8MXD5 290 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 SCGNO76038 276 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 SLCO2B1O94956 709 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 OR4E1P0C645 316 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 NME1P15531 152 aaKnown RBP10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 EIF2S3P41091 472 aaKnown RBP10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 GPR143P51810 404 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 CDK5R1Q15078 307 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 OR1Q1Q15612 314 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 SLC25A30Q5SVS4 291 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 TBC1D3GQ6DHY5 549 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 ZNF600Q6ZNG1 722 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 TMEM91Q6ZNR0 172 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 ZNF550Q7Z398 422 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 TMEM106AQ96A25 262 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 RBM18Q96H35 190 aaKnown RBP10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 WDR77Q9BQA1 342 aaPredicted RBP10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 PHPT1Q9NRX4 125 aaPredicted RBP10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 KCNMB2Q9Y691 235 aa10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 GREB1LQ9C091 1923 aaPredicted RBP10.45□□□□□ -0.74
CRNKL1-204ENST00000490910 ABCD4O14678 606 aa10.44□□□□□ -0.74
CRNKL1-204ENST00000490910 PLPP2O43688 288 aa10.44□□□□□ -0.74
CRNKL1-204ENST00000490910 GAAP10253 952 aa10.44□□□□□ -0.74
CRNKL1-204ENST00000490910 HOXB1P14653 301 aaPredicted RBP10.44□□□□□ -0.74
CRNKL1-204ENST00000490910 CD22P20273 847 aa10.44□□□□□ -0.74
CRNKL1-204ENST00000490910 CD70P32970 193 aa10.44□□□□□ -0.74
CRNKL1-204ENST00000490910 GABRA3P34903 492 aa10.44□□□□□ -0.74
CRNKL1-204ENST00000490910 ABCA11PQ4W5N1 156 aa10.44□□□□□ -0.74
CRNKL1-204ENST00000490910 C5orf46Q6UWT4 87 aa10.44□□□□□ -0.74
CRNKL1-204ENST00000490910 HSD11B1LQ7Z5J1 315 aa10.44□□□□□ -0.74
CRNKL1-204ENST00000490910 MUC20Q8N307 709 aaPredicted RBP10.44□□□□□ -0.74
CRNKL1-204ENST00000490910 DOK4Q8TEW6 326 aa10.44□□□□□ -0.74
CRNKL1-204ENST00000490910 CYB5D2Q8WUJ1 264 aa10.44□□□□□ -0.74
CRNKL1-204ENST00000490910 LCN9Q8WX39 176 aa10.44□□□□□ -0.74
CRNKL1-204ENST00000490910 MS4A4EQ96PG1 132 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms