RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 HIP1O00291 1037 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 UGT1A9O60656 530 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 SUPT3HO75486 399 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 FOXH1O75593 365 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 IGLV2-23P01705 113 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 KLK3P07288 261 aaPredicted RBP2.87□□□□□ -1.95
CCDC39-206ENST00000489868 PLEKP08567 350 aaPredicted RBP2.87□□□□□ -1.95
CCDC39-206ENST00000489868 PNMTP11086 282 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 IGFBP3P17936 291 aaPredicted RBP2.87□□□□□ -1.95
CCDC39-206ENST00000489868 GCAP28676 217 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 DDOSTP39656 456 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 TFPI2P48307 235 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 ARRB1P49407 418 aaPredicted RBP2.87□□□□□ -1.95
CCDC39-206ENST00000489868 ZNF136P52737 540 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 FAM83EQ2M2I3 478 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 LRRC10Q5BKY1 277 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 SLC22A8Q8TCC7 542 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 DTX3LQ8TDB6 740 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 CTNNBL1Q8WYA6 563 aaPredicted RBP2.87□□□□□ -1.95
CCDC39-206ENST00000489868 SECISBP2Q96T21 854 aaKnown RBP2.87□□□□□ -1.95
CCDC39-206ENST00000489868 CTRCQ99895 268 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 ACTR6Q9GZN1 396 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 RBKSQ9H477 322 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 LHX9Q9NQ69 397 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 SEC14L3Q9UDX4 400 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 LAMP5Q9UJQ1 280 aa2.87□□□□□ -1.95
CCDC39-206ENST00000489868 RPL36Q9Y3U8 105 aaKnown RBP2.87□□□□□ -1.95
CCDC39-206ENST00000489868 A0A1B0GWJ7 208 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 RGS16O15492 202 aaPredicted RBP2.86□□□□□ -1.95
CCDC39-206ENST00000489868 SMPD2O60906 423 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 N4BP1O75113 896 aaKnown RBP2.86□□□□□ -1.95
CCDC39-206ENST00000489868 MED6O75586 246 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 IMPDH1P20839 514 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 LAP3P28838 519 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 CXCL5P42830 114 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 GSSP48637 474 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 VGLL4Q14135 290 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 TATDN3Q17R31 274 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 LINC00483Q53H64 154 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 BEND3Q5T5X7 828 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 RIPPLY2Q5TAB7 128 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 C1orf94Q6P1W5 598 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 PGAP1Q75T13 922 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 ABHD12BQ7Z5M8 362 aaPredicted RBP2.86□□□□□ -1.95
CCDC39-206ENST00000489868 CAMK2N1Q7Z7J9 78 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 ZDHHC21Q8IVQ6 265 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 SLC35F2Q8IXU6 374 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 OR4F15Q8NGB8 312 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 FOPNLQ96NB1 174 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 OXGR1Q96P68 337 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 RNF2Q99496 336 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 RSPO3Q9BXY4 272 aaPredicted RBP2.86□□□□□ -1.95
CCDC39-206ENST00000489868 CLMPQ9H6B4 373 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 ZFP14Q9HCL3 533 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 POLDIP2Q9Y2S7 368 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 HEBP2Q9Y5Z4 205 aa2.86□□□□□ -1.95
CCDC39-206ENST00000489868 IGLV4-60A0A075B6I1 120 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 C12orf77C9JDV5 145 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 F5H6K3 240 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 LOC110117498-PIK3R3F6TDL0 507 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 PRRG1O14668 218 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 XPO1O14980 1071 aaKnown RBP2.85□□□□□ -1.95
CCDC39-206ENST00000489868 CD5LO43866 347 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 AIREO43918 545 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 ADCY5O95622 1261 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 PNMA6AP0CW24 399 aaPredicted RBP2.85□□□□□ -1.95
CCDC39-206ENST00000489868 KRT13P13646 458 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 KLRC3Q07444 240 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 MICBQ29980 383 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 SAMD4BQ5PRF9 694 aaKnown RBP2.85□□□□□ -1.95
CCDC39-206ENST00000489868 C1orf220Q5T0J3 134 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 LRRC31Q6UY01 552 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 Q6ZR03 302 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 TMEM123Q8N131 208 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 CYB561D1Q8N8Q1 229 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 Q8N976 141 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 SYT14Q8NB59 555 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 ZNF721Q8TF20 911 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 ASB9Q96DX5 294 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 TGM7Q96PF1 710 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 TAAR1Q96RJ0 339 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 CAPS2Q9BXY5 557 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 GPR61Q9BZJ8 451 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 DNTTIP1Q9H147 329 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 REEP4Q9H6H4 257 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 LIN28AQ9H9Z2 209 aaKnown RBP2.85□□□□□ -1.95
CCDC39-206ENST00000489868 THUMPD1Q9NXG2 353 aaKnown RBP2.85□□□□□ -1.95
CCDC39-206ENST00000489868 TIMM10BQ9Y5J6 103 aa2.85□□□□□ -1.95
CCDC39-206ENST00000489868 ATP6V1C1P21283 382 aa2.84□□□□□ -1.95
CCDC39-206ENST00000489868 CASP4P49662 377 aa2.84□□□□□ -1.95
CCDC39-206ENST00000489868 PPT1P50897 306 aa2.84□□□□□ -1.95
CCDC39-206ENST00000489868 GPM6AP51674 278 aa2.84□□□□□ -1.95
CCDC39-206ENST00000489868 ACVR1Q04771 509 aa2.84□□□□□ -1.95
CCDC39-206ENST00000489868 CYTH1Q15438 398 aa2.84□□□□□ -1.95
CCDC39-206ENST00000489868 SHHQ15465 462 aa2.84□□□□□ -1.95
CCDC39-206ENST00000489868 LY6EQ16553 131 aa2.84□□□□□ -1.95
CCDC39-206ENST00000489868 TMEM183BQ1AE95 376 aa2.84□□□□□ -1.95
CCDC39-206ENST00000489868 SLC36A3Q495N2 470 aa2.84□□□□□ -1.95
CCDC39-206ENST00000489868 MARCH8Q5T0T0 291 aa2.84□□□□□ -1.95
CCDC39-206ENST00000489868 TTC23Q5W5X9 447 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms