RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 TGFBR3Q03167 851 aa11.92□□□□□ -0.5
LMO4-203ENST00000489303 MFSD13AQ14CX5 517 aa11.92□□□□□ -0.5
LMO4-203ENST00000489303 PPA1Q15181 289 aa11.92□□□□□ -0.5
LMO4-203ENST00000489303 TIMM23BQ5SRD1 257 aa11.92□□□□□ -0.5
LMO4-203ENST00000489303 SWT1Q5T5J6 900 aaKnown RBP11.92□□□□□ -0.5
LMO4-203ENST00000489303 FAM69AQ5T7M9 428 aa11.92□□□□□ -0.5
LMO4-203ENST00000489303 OR7E24Q6IFN5 339 aa11.92□□□□□ -0.5
LMO4-203ENST00000489303 ZNF704Q6ZNC4 412 aaPredicted RBP11.92□□□□□ -0.5
LMO4-203ENST00000489303 ABHD12BQ7Z5M8 362 aaPredicted RBP11.92□□□□□ -0.5
LMO4-203ENST00000489303 ZNF433Q8N7K0 673 aaPredicted RBP11.92□□□□□ -0.5
LMO4-203ENST00000489303 POMGNT2Q8NAT1 580 aa11.92□□□□□ -0.5
LMO4-203ENST00000489303 RP9Q8TA86 221 aaKnown RBP11.92□□□□□ -0.5
LMO4-203ENST00000489303 C10orf82Q8WW14 230 aa11.92□□□□□ -0.5
LMO4-203ENST00000489303 ZNF317Q96PQ6 595 aaPredicted RBP11.92□□□□□ -0.5
LMO4-203ENST00000489303 HS3ST6Q96QI5 342 aa11.92□□□□□ -0.5
LMO4-203ENST00000489303 MCHR1Q99705 422 aa11.92□□□□□ -0.5
LMO4-203ENST00000489303 CCL19Q99731 98 aa11.92□□□□□ -0.5
LMO4-203ENST00000489303 MALT1Q9UDY8 824 aa11.92□□□□□ -0.5
LMO4-203ENST00000489303 AP3M1Q9Y2T2 418 aa11.92□□□□□ -0.5
LMO4-203ENST00000489303 TRAV36DV7A0A075B6V5 113 aa11.91□□□□□ -0.5
LMO4-203ENST00000489303 A0A0B4J2E0 115 aa11.91□□□□□ -0.5
LMO4-203ENST00000489303 A0A1B0GX12 115 aa11.91□□□□□ -0.5
LMO4-203ENST00000489303 OR6C65A6NJZ3 312 aa11.91□□□□□ -0.5
LMO4-203ENST00000489303 AIM2O14862 343 aa11.91□□□□□ -0.5
LMO4-203ENST00000489303 RAD51DO75771 328 aa11.91□□□□□ -0.5
LMO4-203ENST00000489303 ZNF43P17038 809 aa11.91□□□□□ -0.5
LMO4-203ENST00000489303 HOXC12P31275 282 aa11.91□□□□□ -0.5
LMO4-203ENST00000489303 IL1RL1Q01638 556 aa11.91□□□□□ -0.5
LMO4-203ENST00000489303 DUSP7Q16829 419 aa11.91□□□□□ -0.5
LMO4-203ENST00000489303 RABL3Q5HYI8 236 aa11.91□□□□□ -0.5
LMO4-203ENST00000489303 ZNF613Q6PF04 617 aa11.91□□□□□ -0.5
LMO4-203ENST00000489303 COMTD1Q86VU5 262 aa11.91□□□□□ -0.5
LMO4-203ENST00000489303 PROX1Q92786 737 aa11.91□□□□□ -0.5
LMO4-203ENST00000489303 KTI12Q96EK9 354 aaPredicted RBP11.91□□□□□ -0.5
LMO4-203ENST00000489303 ARHGDIGQ99819 225 aa11.91□□□□□ -0.5
LMO4-203ENST00000489303 PRR14Q9BWN1 585 aa11.91□□□□□ -0.5
LMO4-203ENST00000489303 NSRP1Q9H0G5 558 aaKnown RBP11.91□□□□□ -0.5
LMO4-203ENST00000489303 ARMCX1Q9P291 453 aa11.91□□□□□ -0.5
LMO4-203ENST00000489303 RNF115Q9Y4L5 304 aa11.91□□□□□ -0.5
LMO4-203ENST00000489303 A0A087WUJ7 227 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 OR5H1A6NKK0 313 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 FTCDNL1E5RQL4 147 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 M0R3H8 397 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 CLOCKO15516 846 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 SMPD2O60906 423 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 LOXP28300 417 aaPredicted RBP11.9□□□□□ -0.5
LMO4-203ENST00000489303 GZMMP51124 257 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 EGR4Q05215 589 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 C1DQ13901 141 aaKnown RBP11.9□□□□□ -0.5
LMO4-203ENST00000489303 VEZF1Q14119 521 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 NRF1Q16656 503 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 NCMAPQ5T1S8 102 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 KLHL17Q6TDP4 642 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 CREB3L2Q70SY1 520 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 CCDC80Q76M96 950 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 SPATA21Q7Z572 469 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 ARPINQ7Z6K5 226 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 C10orf53Q8N6V4 93 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 OR6S1Q8NH40 331 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 VANGL1Q8TAA9 524 aaPredicted RBP11.9□□□□□ -0.5
LMO4-203ENST00000489303 ZNF385AQ96PM9 386 aaKnown RBP11.9□□□□□ -0.5
LMO4-203ENST00000489303 PIP5K1AQ99755 562 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 PTDSS2Q9BVG9 487 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 ASPNQ9BXN1 380 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 RSPO3Q9BXY4 272 aaPredicted RBP11.9□□□□□ -0.5
LMO4-203ENST00000489303 SLCO5A1Q9H2Y9 848 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 SLC7A10Q9NS82 523 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 BAG5Q9UL15 447 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 B3GALT5Q9Y2C3 310 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 CORINQ9Y5Q5 1042 aa11.9□□□□□ -0.5
LMO4-203ENST00000489303 NAV3Q8IVL0 2385 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 DNHD1Q96M86 4753 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 CPSF4LA6NMK7 179 aaKnown RBP11.89□□□□□ -0.51
LMO4-203ENST00000489303 FXYD1O00168 92 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 ARHGEF9O43307 516 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 AKAP8O43823 692 aaKnown RBP11.89□□□□□ -0.51
LMO4-203ENST00000489303 NQO1P15559 274 aaKnown RBP11.89□□□□□ -0.51
LMO4-203ENST00000489303 CD247P20963 164 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 MPGP29372 298 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 GRPRP30550 384 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 NTF4P34130 210 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 P2RY4P51582 365 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 CDH12P55289 794 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 C1QTNF12Q5T7M4 302 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 TSPO2Q5TGU0 170 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 NIPAL3Q6P499 406 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 KLHL24Q6TFL4 600 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 H1FNTQ75WM6 255 aaPredicted RBP11.89□□□□□ -0.51
LMO4-203ENST00000489303 CALHM3Q86XJ0 350 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 P3H2Q8IVL5 708 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 CIARTQ8N365 385 aaPredicted RBP11.89□□□□□ -0.51
LMO4-203ENST00000489303 C17orf78Q8N4C9 275 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 POU5F2Q8N7G0 328 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 ZIC4Q8N9L1 334 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 C1orf162Q8NEQ5 155 aaPredicted RBP11.89□□□□□ -0.51
LMO4-203ENST00000489303 OR2T12Q8NG77 320 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 GPR32P1Q8NGA4 272 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 OR6T1Q8NGN1 323 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 TMEM171Q8WVE6 324 aa11.89□□□□□ -0.51
LMO4-203ENST00000489303 AKAP1Q92667 903 aaKnown RBP eCLIP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms