RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ETF1P62495 437 aaKnown RBP13.91□□□□□ -0.18
USP48-210ENST00000489108 UBA52P62987 128 aaKnown RBP13.91□□□□□ -0.18
USP48-210ENST00000489108 ARF1P84077 181 aaKnown RBP13.91□□□□□ -0.18
USP48-210ENST00000489108 MYBPC1Q00872 1141 aa13.91□□□□□ -0.18
USP48-210ENST00000489108 POU3F1Q03052 451 aaPredicted RBP13.91□□□□□ -0.18
USP48-210ENST00000489108 NPRL3Q12980 569 aa13.91□□□□□ -0.18
USP48-210ENST00000489108 FAM153CQ494X1 144 aa13.91□□□□□ -0.18
USP48-210ENST00000489108 KANK2Q63ZY3 851 aa13.91□□□□□ -0.18
USP48-210ENST00000489108 NIPAL3Q6P499 406 aa13.91□□□□□ -0.18
USP48-210ENST00000489108 CREB3L2Q70SY1 520 aa13.91□□□□□ -0.18
USP48-210ENST00000489108 MZB1Q8WU39 189 aa13.91□□□□□ -0.18
USP48-210ENST00000489108 RAB8BQ92930 207 aa13.91□□□□□ -0.18
USP48-210ENST00000489108 PRPF18Q99633 342 aaKnown RBP13.91□□□□□ -0.18
USP48-210ENST00000489108 DUSP26Q9BV47 211 aa13.91□□□□□ -0.18
USP48-210ENST00000489108 TMPRSS13Q9BYE2 586 aa13.91□□□□□ -0.18
USP48-210ENST00000489108 MRPL37Q9BZE1 423 aaKnown RBP13.91□□□□□ -0.18
USP48-210ENST00000489108 MS4A5Q9H3V2 200 aa13.91□□□□□ -0.18
USP48-210ENST00000489108 CRLF2Q9HC73 371 aa13.91□□□□□ -0.18
USP48-210ENST00000489108 MOV10Q9HCE1 1003 aaKnown RBP13.91□□□□□ -0.18
USP48-210ENST00000489108 ZNF275Q9NSD4 429 aaPredicted RBP13.91□□□□□ -0.18
USP48-210ENST00000489108 TMEM233B4DJY2 109 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 M0R233 179 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 PLIN3O60664 434 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 SCN2BO60939 215 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 GLRA3O75311 464 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 LYPLA1O75608 230 aaPredicted RBP13.9□□□□□ -0.18
USP48-210ENST00000489108 ADRA2CP18825 462 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 MAPK1P28482 360 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 P2RY4P51582 365 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 ROR2Q01974 943 aaKnown RBP13.9□□□□□ -0.18
USP48-210ENST00000489108 FUT5Q11128 374 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 UGT3A2Q3SY77 523 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 ZNF311Q5JNZ3 666 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 FRRS1Q6ZNA5 592 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 C1QL2Q7Z5L3 287 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 EPHX4Q8IUS5 362 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 RIMKLAQ8IXN7 391 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 CLECL1Q8IZS7 167 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 RIBC1Q8N443 379 aaPredicted RBP13.9□□□□□ -0.18
USP48-210ENST00000489108 BPIFB2Q8N4F0 458 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 LRRC17Q8N6Y2 441 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 TWIST2Q8WVJ9 160 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 OIT3Q8WWZ8 545 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 ROPN1LQ96C74 230 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 C1orf50Q9BV19 199 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 NOX3Q9HBY0 568 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 SLC52A3Q9NQ40 469 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 DDX28Q9NUL7 540 aaKnown RBP13.9□□□□□ -0.18
USP48-210ENST00000489108 TBK1Q9UHD2 729 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 PPIAL4AQ9Y536 164 aa13.9□□□□□ -0.18
USP48-210ENST00000489108 VWFP04275 2813 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 RNF103-CHMP3A0A140T963 221 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 PIP5K1BO14986 540 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 GUSBP08236 651 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 NR4A1P22736 598 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 ARR3P36575 388 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 ALDH3B1P43353 468 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 EVX1P49640 407 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 MAP2K6P52564 334 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 PGS1Q32NB8 556 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 CCDC153Q494R4 210 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 ATAD3BQ5T9A4 648 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 IL23RQ5VWK5 629 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 ACSM5Q6NUN0 579 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 MDP1Q86V88 176 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 CCDC63Q8NA47 563 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 IL17RDQ8NFM7 739 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 C22orf15Q8WYQ4 148 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 PPP3R2Q96LZ3 170 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 GATA5Q9BWX5 397 aaPredicted RBP13.89□□□□□ -0.19
USP48-210ENST00000489108 LINC00470Q9BZP3 86 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 POLE3Q9NRF9 147 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 ADPRHL2Q9NX46 363 aa13.89□□□□□ -0.19
USP48-210ENST00000489108 PRAMEF27A3QJZ7 478 aa13.88□□□□□ -0.19
USP48-210ENST00000489108 PLPP2O43688 288 aa13.88□□□□□ -0.19
USP48-210ENST00000489108 MPZL1O95297 269 aa13.88□□□□□ -0.19
USP48-210ENST00000489108 FGF4P08620 206 aa13.88□□□□□ -0.19
USP48-210ENST00000489108 ABHD2P08910 425 aa13.88□□□□□ -0.19
USP48-210ENST00000489108 ANPEPP15144 967 aa13.88□□□□□ -0.19
USP48-210ENST00000489108 PRPS1L1P21108 318 aa13.88□□□□□ -0.19
USP48-210ENST00000489108 SH3BGRP55822 239 aaPredicted RBP13.88□□□□□ -0.19
USP48-210ENST00000489108 BNIP2Q12982 314 aa13.88□□□□□ -0.19
USP48-210ENST00000489108 TNFAIP8L2Q6P589 184 aaPredicted RBP13.88□□□□□ -0.19
USP48-210ENST00000489108 LRP11Q86VZ4 500 aa13.88□□□□□ -0.19
USP48-210ENST00000489108 C10orf107Q8IVU9 208 aa13.88□□□□□ -0.19
USP48-210ENST00000489108 NANPQ8TBE9 248 aa13.88□□□□□ -0.19
USP48-210ENST00000489108 MIPOL1Q8TD10 442 aa13.88□□□□□ -0.19
USP48-210ENST00000489108 SYT3Q9BQG1 590 aa13.88□□□□□ -0.19
USP48-210ENST00000489108 C1QTNF5Q9BXJ0 243 aa13.88□□□□□ -0.19
USP48-210ENST00000489108 PRKDCP78527 4128 aaKnown RBP13.88□□□□□ -0.19
USP48-210ENST00000489108 ARHGAP32A7KAX9 2087 aa13.87□□□□□ -0.19
USP48-210ENST00000489108 RP2O75695 350 aa13.87□□□□□ -0.19
USP48-210ENST00000489108 NCR1O76036 304 aa13.87□□□□□ -0.19
USP48-210ENST00000489108 VAMP5O95183 116 aa13.87□□□□□ -0.19
USP48-210ENST00000489108 AGR2O95994 175 aa13.87□□□□□ -0.19
USP48-210ENST00000489108 GSNP06396 782 aa13.87□□□□□ -0.19
USP48-210ENST00000489108 CHRNGP07510 517 aa13.87□□□□□ -0.19
USP48-210ENST00000489108 CXCR1P25024 350 aa13.87□□□□□ -0.19
USP48-210ENST00000489108 MAD2L1BPQ15013 274 aaPredicted RBP13.87□□□□□ -0.19
USP48-210ENST00000489108 GPAT3Q53EU6 434 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms