RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 ELOA3Q8NG57 546 aa20.18■□□□□ 0.82
COL9A3-213ENST00000489045 MFSD8Q8NHS3 518 aa20.18■□□□□ 0.82
COL9A3-213ENST00000489045 SLC25A36Q96CQ1 311 aa20.18■□□□□ 0.82
COL9A3-213ENST00000489045 KTI12Q96EK9 354 aaPredicted RBP20.18■□□□□ 0.82
COL9A3-213ENST00000489045 PTDSS2Q9BVG9 487 aa20.18■□□□□ 0.82
COL9A3-213ENST00000489045 SPATA5L1Q9BVQ7 753 aa20.18■□□□□ 0.82
COL9A3-213ENST00000489045 VIPAS39Q9H9C1 493 aa20.18■□□□□ 0.82
COL9A3-213ENST00000489045 FAIMQ9NVQ4 179 aa20.18■□□□□ 0.82
COL9A3-213ENST00000489045 CORO2BQ9UQ03 480 aa20.18■□□□□ 0.82
COL9A3-213ENST00000489045 AMDHD2Q9Y303 409 aa20.18■□□□□ 0.82
COL9A3-213ENST00000489045 EVPLLA8MZ36 301 aa20.17■□□□□ 0.82
COL9A3-213ENST00000489045 FTCDNL1E5RQL4 147 aa20.17■□□□□ 0.82
COL9A3-213ENST00000489045 TPST1O60507 370 aa20.17■□□□□ 0.82
COL9A3-213ENST00000489045 GPX2P18283 190 aa20.17■□□□□ 0.82
COL9A3-213ENST00000489045 PTNP21246 168 aa20.17■□□□□ 0.82
COL9A3-213ENST00000489045 HTR2AP28223 471 aa20.17■□□□□ 0.82
COL9A3-213ENST00000489045 VEZF1Q14119 521 aa20.17■□□□□ 0.82
COL9A3-213ENST00000489045 CLEC12BQ2HXU8 276 aa20.17■□□□□ 0.82
COL9A3-213ENST00000489045 GLIPR1L2Q4G1C9 344 aa20.17■□□□□ 0.82
COL9A3-213ENST00000489045 C6orf89Q6UWU4 347 aa20.17■□□□□ 0.82
COL9A3-213ENST00000489045 DLEU7Q6UYE1 221 aa20.17■□□□□ 0.82
COL9A3-213ENST00000489045 CREB3L2Q70SY1 520 aa20.17■□□□□ 0.82
COL9A3-213ENST00000489045 STON2Q8WXE9 905 aa20.17■□□□□ 0.82
COL9A3-213ENST00000489045 CPPED1Q9BRF8 314 aaPredicted RBP20.17■□□□□ 0.82
COL9A3-213ENST00000489045 RABEP2Q9H5N1 569 aa20.17■□□□□ 0.82
COL9A3-213ENST00000489045 TMEM38AQ9H6F2 299 aa20.17■□□□□ 0.82
COL9A3-213ENST00000489045 ARGLU1Q9NWB6 273 aaPredicted RBP20.17■□□□□ 0.82
COL9A3-213ENST00000489045 POU2F3Q9UKI9 436 aa20.17■□□□□ 0.82
COL9A3-213ENST00000489045 RASD1Q9Y272 281 aa20.17■□□□□ 0.82
COL9A3-213ENST00000489045 CR1P17927 2039 aa20.16■□□□□ 0.82
COL9A3-213ENST00000489045 A0A1B0GWA3 101 aa20.16■□□□□ 0.82
COL9A3-213ENST00000489045 E7EQL1 145 aa20.16■□□□□ 0.82
COL9A3-213ENST00000489045 IGHV4-39P01824 125 aa20.16■□□□□ 0.82
COL9A3-213ENST00000489045 PNMTP11086 282 aa20.16■□□□□ 0.82
COL9A3-213ENST00000489045 CDH2P19022 906 aaPredicted RBP20.16■□□□□ 0.82
COL9A3-213ENST00000489045 SLC6A2P23975 617 aa20.16■□□□□ 0.82
COL9A3-213ENST00000489045 GTF2E2P29084 291 aaKnown RBP20.16■□□□□ 0.82
COL9A3-213ENST00000489045 SELENOPP49908 381 aa20.16■□□□□ 0.82
COL9A3-213ENST00000489045 LGALS3BPQ08380 585 aa20.16■□□□□ 0.82
COL9A3-213ENST00000489045 ETFDHQ16134 617 aa20.16■□□□□ 0.82
COL9A3-213ENST00000489045 ADRM1Q16186 407 aa20.16■□□□□ 0.82
COL9A3-213ENST00000489045 ABHD12BQ7Z5M8 362 aaPredicted RBP20.16■□□□□ 0.82
COL9A3-213ENST00000489045 EPHX4Q8IUS5 362 aa20.16■□□□□ 0.82
COL9A3-213ENST00000489045 LSMEM1Q8N8F7 131 aa20.16■□□□□ 0.82
COL9A3-213ENST00000489045 GRIP2Q9C0E4 1043 aa20.16■□□□□ 0.82
COL9A3-213ENST00000489045 C12orf10Q9HB07 376 aa20.16■□□□□ 0.82
COL9A3-213ENST00000489045 SEC14L4Q9UDX3 406 aa20.16■□□□□ 0.82
COL9A3-213ENST00000489045 LEF1Q9UJU2 399 aaPredicted RBP20.16■□□□□ 0.82
COL9A3-213ENST00000489045 NDUFS7O75251 213 aa20.15■□□□□ 0.82
COL9A3-213ENST00000489045 KRT33AO76009 404 aa20.15■□□□□ 0.82
COL9A3-213ENST00000489045 H2AFXP16104 143 aaPredicted RBP20.15■□□□□ 0.82
COL9A3-213ENST00000489045 AQP1P29972 269 aa20.15■□□□□ 0.82
COL9A3-213ENST00000489045 AGAP6Q5VW22 663 aa20.15■□□□□ 0.82
COL9A3-213ENST00000489045 NIPAL3Q6P499 406 aa20.15■□□□□ 0.82
COL9A3-213ENST00000489045 B3GLCTQ6Y288 498 aa20.15■□□□□ 0.82
COL9A3-213ENST00000489045 KDM8Q8N371 416 aa20.15■□□□□ 0.82
COL9A3-213ENST00000489045 ALKBH3Q96Q83 286 aaPredicted RBP20.15■□□□□ 0.82
COL9A3-213ENST00000489045 ZNF607Q96SK3 696 aa20.15■□□□□ 0.82
COL9A3-213ENST00000489045 PRR14Q9BWN1 585 aa20.15■□□□□ 0.82
COL9A3-213ENST00000489045 ZNF385DQ9H6B1 395 aa20.15■□□□□ 0.82
COL9A3-213ENST00000489045 NPHS2Q9NP85 383 aa20.15■□□□□ 0.82
COL9A3-213ENST00000489045 GDF2Q9UK05 429 aaPredicted RBP20.15■□□□□ 0.82
COL9A3-213ENST00000489045 HIVEP2P31629 2446 aa20.15■□□□□ 0.82
COL9A3-213ENST00000489045 ACVR1BP36896 505 aa20.14■□□□□ 0.81
COL9A3-213ENST00000489045 RGS8P57771 180 aaPredicted RBP20.14■□□□□ 0.81
COL9A3-213ENST00000489045 NCALDP61601 193 aa20.14■□□□□ 0.81
COL9A3-213ENST00000489045 HIKESHIQ53FT3 197 aa20.14■□□□□ 0.81
COL9A3-213ENST00000489045 RUNDC3AQ59EK9 446 aa20.14■□□□□ 0.81
COL9A3-213ENST00000489045 ALG10BQ5I7T1 473 aa20.14■□□□□ 0.81
COL9A3-213ENST00000489045 KLHL24Q6TFL4 600 aa20.14■□□□□ 0.81
COL9A3-213ENST00000489045 DHDDSQ86SQ9 333 aa20.14■□□□□ 0.81
COL9A3-213ENST00000489045 DEPDC4Q8N2C3 294 aa20.14■□□□□ 0.81
COL9A3-213ENST00000489045 HIPK4Q8NE63 616 aa20.14■□□□□ 0.81
COL9A3-213ENST00000489045 SLC38A4Q969I6 547 aa20.14■□□□□ 0.81
COL9A3-213ENST00000489045 DHRS9Q9BPW9 319 aa20.14■□□□□ 0.81
COL9A3-213ENST00000489045 TESQ9UGI8 421 aaKnown RBP20.14■□□□□ 0.81
COL9A3-213ENST00000489045 NDUFAF1Q9Y375 327 aa20.14■□□□□ 0.81
COL9A3-213ENST00000489045 IGKV1D-42A0A075B6H8 117 aa20.13■□□□□ 0.81
COL9A3-213ENST00000489045 PRORSD1PA6NEY8 169 aa20.13■□□□□ 0.81
COL9A3-213ENST00000489045 ZNF587BE7ETH6 402 aa20.13■□□□□ 0.81
COL9A3-213ENST00000489045 EDF1O60869 148 aaKnown RBP20.13■□□□□ 0.81
COL9A3-213ENST00000489045 FZD7O75084 574 aa20.13■□□□□ 0.81
COL9A3-213ENST00000489045 LGI1O95970 557 aa20.13■□□□□ 0.81
COL9A3-213ENST00000489045 WNT11O96014 354 aa20.13■□□□□ 0.81
COL9A3-213ENST00000489045 TTKP33981 857 aa20.13■□□□□ 0.81
COL9A3-213ENST00000489045 PRPS1P60891 318 aa20.13■□□□□ 0.81
COL9A3-213ENST00000489045 C11orf71Q6IPW1 123 aa20.13■□□□□ 0.81
COL9A3-213ENST00000489045 OR1K1Q8NGR3 316 aa20.13■□□□□ 0.81
COL9A3-213ENST00000489045 DNAJA4Q8WW22 397 aaPredicted RBP20.13■□□□□ 0.81
COL9A3-213ENST00000489045 TAAR8Q969N4 342 aa20.13■□□□□ 0.81
COL9A3-213ENST00000489045 HS6ST2Q96MM7 605 aa20.13■□□□□ 0.81
COL9A3-213ENST00000489045 TRIM33Q9UPN9 1127 aa20.13■□□□□ 0.81
COL9A3-213ENST00000489045 ANGPT4Q9Y264 503 aa20.13■□□□□ 0.81
COL9A3-213ENST00000489045 B3GALT5Q9Y2C3 310 aa20.13■□□□□ 0.81
COL9A3-213ENST00000489045 RNF223E7ERA6 249 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 M0R082 166 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 ANGPT2O15123 496 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 OR2T1O43869 369 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 CLDN17P56750 224 aa20.12■□□□□ 0.81
COL9A3-213ENST00000489045 SELPLGQ14242 412 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms