RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 EPYCQ99645 322 aa16.55■□□□□ 0.24
PTCD3-217ENST00000488801 MUC13Q9H3R2 512 aa16.55■□□□□ 0.24
PTCD3-217ENST00000488801 ELOVL5Q9NYP7 299 aa16.55■□□□□ 0.24
PTCD3-217ENST00000488801 EMC3Q9P0I2 261 aa16.55■□□□□ 0.24
PTCD3-217ENST00000488801 B3GAT1Q9P2W7 334 aa16.55■□□□□ 0.24
PTCD3-217ENST00000488801 SEC14L4Q9UDX3 406 aa16.55■□□□□ 0.24
PTCD3-217ENST00000488801 SAMD4AQ9UPU9 718 aaKnown RBP16.55■□□□□ 0.24
PTCD3-217ENST00000488801 CADP27708 2225 aa16.54■□□□□ 0.24
PTCD3-217ENST00000488801 GPR171O14626 319 aa16.54■□□□□ 0.24
PTCD3-217ENST00000488801 HNRNPRO43390 633 aaKnown RBP16.54■□□□□ 0.24
PTCD3-217ENST00000488801 VAMP5O95183 116 aa16.54■□□□□ 0.24
PTCD3-217ENST00000488801 ATP6V1B2P21281 511 aa16.54■□□□□ 0.24
PTCD3-217ENST00000488801 UQCRC1P31930 480 aa16.54■□□□□ 0.24
PTCD3-217ENST00000488801 CD79BP40259 229 aa16.54■□□□□ 0.24
PTCD3-217ENST00000488801 RBM34P42696 430 aaKnown RBP16.54■□□□□ 0.24
PTCD3-217ENST00000488801 TAS2R41P59536 307 aa16.54■□□□□ 0.24
PTCD3-217ENST00000488801 MFSD13AQ14CX5 517 aa16.54■□□□□ 0.24
PTCD3-217ENST00000488801 GALNT5Q7Z7M9 940 aa16.54■□□□□ 0.24
PTCD3-217ENST00000488801 NKAIN4Q8IVV8 208 aa16.54■□□□□ 0.24
PTCD3-217ENST00000488801 GABRG1Q8N1C3 465 aa16.54■□□□□ 0.24
PTCD3-217ENST00000488801 ZIC4Q8N9L1 334 aa16.54■□□□□ 0.24
PTCD3-217ENST00000488801 SCAIQ8N9R8 606 aa16.54■□□□□ 0.24
PTCD3-217ENST00000488801 OR9K2Q8NGE7 335 aa16.54■□□□□ 0.24
PTCD3-217ENST00000488801 MOGAT1Q96PD6 335 aa16.54■□□□□ 0.24
PTCD3-217ENST00000488801 C12orf49Q9H741 205 aa16.54■□□□□ 0.24
PTCD3-217ENST00000488801 MEPEQ9NQ76 525 aaPredicted RBP16.54■□□□□ 0.24
PTCD3-217ENST00000488801 ACTR3BQ9P1U1 418 aa16.54■□□□□ 0.24
PTCD3-217ENST00000488801 RIMS3Q9UJD0 308 aa16.54■□□□□ 0.24
PTCD3-217ENST00000488801 ANKRD17O75179 2603 aaKnown RBP16.54■□□□□ 0.24
PTCD3-217ENST00000488801 HEATR1Q9H583 2144 aaKnown RBP16.54■□□□□ 0.24
PTCD3-217ENST00000488801 AKAP6Q13023 2319 aa16.53■□□□□ 0.24
PTCD3-217ENST00000488801 M0R082 166 aa16.53■□□□□ 0.24
PTCD3-217ENST00000488801 MT-ATP6P00846 226 aa16.53■□□□□ 0.24
PTCD3-217ENST00000488801 COX6B1P14854 86 aa16.53■□□□□ 0.24
PTCD3-217ENST00000488801 PTNP21246 168 aa16.53■□□□□ 0.24
PTCD3-217ENST00000488801 GRPRP30550 384 aa16.53■□□□□ 0.24
PTCD3-217ENST00000488801 UGT2B15P54855 530 aa16.53■□□□□ 0.24
PTCD3-217ENST00000488801 BNIP1Q12981 228 aa16.53■□□□□ 0.24
PTCD3-217ENST00000488801 ZNF74Q16587 644 aa16.53■□□□□ 0.24
PTCD3-217ENST00000488801 LCN8Q6JVE9 175 aa16.53■□□□□ 0.24
PTCD3-217ENST00000488801 KIF18BQ86Y91 864 aa16.53■□□□□ 0.24
PTCD3-217ENST00000488801 ZNF295-AS1Q8N0V1 137 aa16.53■□□□□ 0.24
PTCD3-217ENST00000488801 ZNF417Q8TAU3 575 aa16.53■□□□□ 0.24
PTCD3-217ENST00000488801 ZNF587Q96SQ5 575 aaPredicted RBP16.53■□□□□ 0.24
PTCD3-217ENST00000488801 FANCFQ9NPI8 374 aa16.53■□□□□ 0.24
PTCD3-217ENST00000488801 RASD1Q9Y272 281 aa16.53■□□□□ 0.24
PTCD3-217ENST00000488801 B3GALT5Q9Y2C3 310 aa16.53■□□□□ 0.24
PTCD3-217ENST00000488801 CORINQ9Y5Q5 1042 aa16.53■□□□□ 0.24
PTCD3-217ENST00000488801 ENPP4Q9Y6X5 453 aa16.53■□□□□ 0.24
PTCD3-217ENST00000488801 PLCE1Q9P212 2302 aa16.52■□□□□ 0.24
PTCD3-217ENST00000488801 LOC102725191A0A1B0GVB3 256 aa16.52■□□□□ 0.24
PTCD3-217ENST00000488801 LRRN3E7EW58 273 aa16.52■□□□□ 0.24
PTCD3-217ENST00000488801 J3KTA2 159 aa16.52■□□□□ 0.24
PTCD3-217ENST00000488801 CNOT4O95628 575 aaKnown RBP16.52■□□□□ 0.24
PTCD3-217ENST00000488801 VLDLRP98155 873 aa16.52■□□□□ 0.24
PTCD3-217ENST00000488801 FAM27E3Q08E93 113 aa16.52■□□□□ 0.24
PTCD3-217ENST00000488801 TTC33Q6PID6 262 aaPredicted RBP16.52■□□□□ 0.24
PTCD3-217ENST00000488801 NHLRC1Q6VVB1 395 aa16.52■□□□□ 0.24
PTCD3-217ENST00000488801 BEND4Q6ZU67 534 aa16.52■□□□□ 0.24
PTCD3-217ENST00000488801 SLC46A3Q7Z3Q1 461 aa16.52■□□□□ 0.24
PTCD3-217ENST00000488801 TMEM255BQ8WV15 326 aa16.52■□□□□ 0.24
PTCD3-217ENST00000488801 MARVELD3Q96A59 401 aa16.52■□□□□ 0.24
PTCD3-217ENST00000488801 SLC25A36Q96CQ1 311 aa16.52■□□□□ 0.24
PTCD3-217ENST00000488801 DHRS1Q96LJ7 313 aa16.52■□□□□ 0.24
PTCD3-217ENST00000488801 NSMCE2Q96MF7 247 aa16.52■□□□□ 0.24
PTCD3-217ENST00000488801 MRPL39Q9NYK5 338 aaKnown RBP16.52■□□□□ 0.24
PTCD3-217ENST00000488801 NDUFAF4Q9P032 175 aa16.52■□□□□ 0.24
PTCD3-217ENST00000488801 MALT1Q9UDY8 824 aa16.52■□□□□ 0.24
PTCD3-217ENST00000488801 KCNN3Q9UGI6 736 aa16.52■□□□□ 0.24
PTCD3-217ENST00000488801 TACC2O95359 2948 aa16.52■□□□□ 0.23
PTCD3-217ENST00000488801 TCRBV5S2A0A599 114 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 PDE5AO76074 875 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 MT-ND1P03886 318 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 ASAH2BP0C7U1 165 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 POU2F1P14859 743 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 PSMB1P20618 241 aaKnown RBP16.51■□□□□ 0.23
PTCD3-217ENST00000488801 COX5AP20674 150 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 UGT2B10P36537 528 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 MS4A2Q01362 244 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 ST3GAL3Q11203 375 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 TRIM25Q14258 630 aaKnown RBP16.51■□□□□ 0.23
PTCD3-217ENST00000488801 MTX3Q5HYI7 312 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 PGM2L1Q6PCE3 622 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 STAC2Q6ZMT1 411 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 FKBP9P1Q75LS8 142 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 EPHX4Q8IUS5 362 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 PIK3C3Q8NEB9 887 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 RNF217Q8TC41 542 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 LIPHQ8WWY8 451 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 ASB9Q96DX5 294 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 C14orf79Q96F83 325 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 PYURFQ96I23 114 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 ZNF385AQ96PM9 386 aaKnown RBP16.51■□□□□ 0.23
PTCD3-217ENST00000488801 ANKRD19PQ9H560 264 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 FKRPQ9H9S5 495 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 SLC24A3Q9HC58 644 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 NOSIPQ9Y314 301 aaKnown RBP16.51■□□□□ 0.23
PTCD3-217ENST00000488801 SPG11Q96JI7 2443 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 ROS1P08922 2347 aa16.51■□□□□ 0.23
PTCD3-217ENST00000488801 NOTCH2Q04721 2471 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms