RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ACHEP22303 614 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 COL8A2P25067 703 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 NTF4P34130 210 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 FLOT2Q14254 428 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 HLXQ14774 488 aaPredicted RBP10.03□□□□□ -0.8
TRIM56-204ENST00000487252 DCAF12L2Q5VW00 463 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 FAM219BQ5XKK7 198 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 FAM180BQ6P0A1 224 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 C16orf87Q6PH81 154 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 GPRIN3Q6ZVF9 776 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 HOMEZQ8IX15 550 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 BCL6BQ8N143 479 aaPredicted RBP10.03□□□□□ -0.8
TRIM56-204ENST00000487252 MIER2Q8N344 545 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 CDYL2Q8N8U2 506 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 NUP37Q8NFH4 326 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 OR4F5Q8NH21 305 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 GTF3AQ92664 365 aaKnown RBP10.03□□□□□ -0.8
TRIM56-204ENST00000487252 ASB9Q96DX5 294 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 BOD1Q96IK1 185 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 NR1H4Q96RI1 486 aaPredicted RBP10.03□□□□□ -0.8
TRIM56-204ENST00000487252 KCNA7Q96RP8 456 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 KATNB1Q9BVA0 655 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 ZNF442Q9H7R0 627 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 HHATLQ9HCP6 504 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 CD274Q9NZQ7 290 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 TMEM181Q9P2C4 612 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 ARHGAP32A7KAX9 2087 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 DNAH1Q9P2D7 4330 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 C5orf63A6NC05 138 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 GJE1A6NN92 205 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 ALG1L2C9J202 215 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 CFLARO15519 480 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 UTS2O95399 124 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 CHEK2O96017 543 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 NGFP01138 241 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 LINC00032P0C843 101 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 EIF1P41567 113 aaKnown RBP10.02□□□□□ -0.81
TRIM56-204ENST00000487252 SLC1A3P43003 542 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 ZNF41P51814 821 aaPredicted RBP10.02□□□□□ -0.81
TRIM56-204ENST00000487252 RELBQ01201 579 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 TRIM25Q14258 630 aaKnown RBP10.02□□□□□ -0.81
TRIM56-204ENST00000487252 PDCD4Q53EL6 469 aaKnown RBP10.02□□□□□ -0.81
TRIM56-204ENST00000487252 SAMD4BQ5PRF9 694 aaKnown RBP10.02□□□□□ -0.81
TRIM56-204ENST00000487252 BLOC1S3Q6QNY0 202 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 CCBE1Q6UXH8 406 aaPredicted RBP10.02□□□□□ -0.81
TRIM56-204ENST00000487252 IZUMO2Q6UXV1 221 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 SPATC1Q76KD6 591 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 RETREG3Q86VR2 466 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 UBE2J2Q8N2K1 259 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 PQLC1Q8N2U9 271 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 FAM110DQ8TAY7 271 aaPredicted RBP10.02□□□□□ -0.81
TRIM56-204ENST00000487252 WDR20Q8TBZ3 569 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 ZFP90Q8TF47 636 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 TUBGCP3Q96CW5 907 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 HOPXQ9BPY8 73 aaPredicted RBP10.02□□□□□ -0.81
TRIM56-204ENST00000487252 ZNF665Q9H7R5 613 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 PRM3Q9NNZ6 103 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 SPAG4Q9NPE6 437 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 PLEK2Q9NYT0 353 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 TAS2R9Q9NYW1 312 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 CCDC167Q9P0B6 97 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 ABCD2Q9UBJ2 740 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 NUP50Q9UKX7 468 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 ICAM5Q9UMF0 924 aa10.02□□□□□ -0.81
TRIM56-204ENST00000487252 TCRBV3S1A0A5B6 114 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 CLPSL1A2RUU4 121 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 FXYD1O00168 92 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 OR7A17O14581 309 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 NDUFA7O95182 113 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 S100BP04271 92 aaPredicted RBP10.01□□□□□ -0.81
TRIM56-204ENST00000487252 KLK1P06870 262 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 NGFRP08138 427 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 PRPS1P60891 318 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 PHEXP78562 749 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 MRPS11P82912 194 aaKnown RBP10.01□□□□□ -0.81
TRIM56-204ENST00000487252 PDK3Q15120 406 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 DECR1Q16698 335 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 SMU1Q2TAY7 513 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 GRAMD1BQ3KR37 738 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 TMEM176BQ3YBM2 270 aaPredicted RBP10.01□□□□□ -0.81
TRIM56-204ENST00000487252 MMEL1Q495T6 779 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 KLF17Q5JT82 389 aaPredicted RBP10.01□□□□□ -0.81
TRIM56-204ENST00000487252 LIPJQ5W064 366 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 GOLGA7Q7Z5G4 137 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 DDIASQ8IXT1 998 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 ZNF527Q8NB42 609 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 PCYOX1LQ8NBM8 494 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 BHLHE22Q8NFJ8 381 aaPredicted RBP10.01□□□□□ -0.81
TRIM56-204ENST00000487252 OR9I1Q8NGQ6 314 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 OR2T11Q8NH01 316 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 RNF166Q96A37 237 aaPredicted RBP10.01□□□□□ -0.81
TRIM56-204ENST00000487252 APH1AQ96BI3 265 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 ZNF275Q9NSD4 429 aaPredicted RBP10.01□□□□□ -0.81
TRIM56-204ENST00000487252 ZIM2Q9NZV7 527 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 GIMAP2Q9UG22 337 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 RIMS3Q9UJD0 308 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 PSME2Q9UL46 239 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 TIMM22Q9Y584 194 aa10.01□□□□□ -0.81
TRIM56-204ENST00000487252 PRORSD1PA6NEY8 169 aa10□□□□□ -0.81
TRIM56-204ENST00000487252 VGLL3A8MV65 326 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms