RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 LOC102725191A0A1B0GVB3 256 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 C19orf84I3L1E1 186 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 UBOX5O94941 541 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 T-ENOLP0DO92 83 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 ZNF43P17038 809 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 TNFRSF1BP20333 461 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 PSMB1P20618 241 aaKnown RBP13.01□□□□□ -0.33
LIMS3-205ENST00000487150 SMIM11AP58511 58 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 C1DQ13901 141 aaKnown RBP13.01□□□□□ -0.33
LIMS3-205ENST00000487150 TRAM2Q15035 370 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 CASP12Q6UXS9 341 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 LINC00114Q6XXX2 140 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 Q6ZT83 130 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 ZNF610Q8N9Z0 462 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 OR9K2Q8NGE7 335 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 TMEM239Q8WW34 195 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 TAAR8Q969N4 342 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 ASB9Q96DX5 294 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 DACH2Q96NX9 599 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 ZNF300Q96RE9 604 aaPredicted RBP13.01□□□□□ -0.33
LIMS3-205ENST00000487150 PRR14Q9BWN1 585 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 C12orf49Q9H741 205 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 MRPL39Q9NYK5 338 aaKnown RBP13.01□□□□□ -0.33
LIMS3-205ENST00000487150 TAS2R1Q9NYW7 299 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 GMPR2Q9P2T1 348 aaKnown RBP13.01□□□□□ -0.33
LIMS3-205ENST00000487150 ZNF229Q9UJW7 825 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 RCE1Q9Y256 329 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 MED31Q9Y3C7 131 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 ENPP4Q9Y6X5 453 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 ICE1Q9Y2F5 2266 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 PCNX1Q96RV3 2341 aa13.01□□□□□ -0.33
LIMS3-205ENST00000487150 M0R082 166 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 OR6A2O95222 327 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 MT-ND1P03886 318 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 HIST1H2ABP04908 130 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 RHCEP18577 417 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 GRPRP30550 384 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 UGT2B10P36537 528 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 PUDPQ08623 228 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 PIN1Q13526 163 aaPredicted RBP13□□□□□ -0.33
LIMS3-205ENST00000487150 EXOC3L2Q2M3D2 409 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 C1QTNF12Q5T7M4 302 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 ZNF474Q6S9Z5 364 aaPredicted RBP13□□□□□ -0.33
LIMS3-205ENST00000487150 RINLQ6ZS11 566 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 HIST3H2AQ7L7L0 130 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 CCDC103Q8IW40 242 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 TMEM99Q8N816 258 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 POMGNT2Q8NAT1 580 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 FAM156AQ8NDB6 213 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 STEAP2Q8NFT2 490 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 ZNF417Q8TAU3 575 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 HIST1H2ACQ93077 130 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 DNAJA3Q96EY1 480 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 PYURFQ96I23 114 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 LRGUKQ96M69 825 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 OXGR1Q96P68 337 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 ZNF587Q96SQ5 575 aaPredicted RBP13□□□□□ -0.33
LIMS3-205ENST00000487150 NDEL1Q9GZM8 345 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 NANSQ9NR45 359 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 ZNF226Q9NYT6 803 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 ING1Q9UK53 422 aaPredicted RBP13□□□□□ -0.33
LIMS3-205ENST00000487150 GPR52Q9Y2T5 361 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 NOX1Q9Y5S8 564 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 FLVCR1Q9Y5Y0 555 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 HECTD1Q9ULT8 2610 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 ARHGAP21Q5T5U3 1957 aa13□□□□□ -0.33
LIMS3-205ENST00000487150 CASKO14936 926 aa12.99□□□□□ -0.33
LIMS3-205ENST00000487150 LYPD3O95274 346 aa12.99□□□□□ -0.33
LIMS3-205ENST00000487150 BGLAPP02818 100 aa12.99□□□□□ -0.33
LIMS3-205ENST00000487150 IL32P24001 234 aa12.99□□□□□ -0.33
LIMS3-205ENST00000487150 IL1RL1Q01638 556 aa12.99□□□□□ -0.33
LIMS3-205ENST00000487150 PMS2P3Q13401 168 aa12.99□□□□□ -0.33
LIMS3-205ENST00000487150 TRIM25Q14258 630 aaKnown RBP12.99□□□□□ -0.33
LIMS3-205ENST00000487150 ZNF74Q16587 644 aa12.99□□□□□ -0.33
LIMS3-205ENST00000487150 LCN8Q6JVE9 175 aa12.99□□□□□ -0.33
LIMS3-205ENST00000487150 RRM2BQ7LG56 351 aa12.99□□□□□ -0.33
LIMS3-205ENST00000487150 NUFIP2Q7Z417 695 aaKnown RBP12.99□□□□□ -0.33
LIMS3-205ENST00000487150 HDDC2Q7Z4H3 204 aa12.99□□□□□ -0.33
LIMS3-205ENST00000487150 DHFR2Q86XF0 187 aa12.99□□□□□ -0.33
LIMS3-205ENST00000487150 CDK20Q8IZL9 346 aa12.99□□□□□ -0.33
LIMS3-205ENST00000487150 RNF113BQ8IZP6 322 aaKnown RBP12.99□□□□□ -0.33
LIMS3-205ENST00000487150 OR5J2Q8NH18 312 aa12.99□□□□□ -0.33
LIMS3-205ENST00000487150 KISS1RQ969F8 398 aaPredicted RBP12.99□□□□□ -0.33
LIMS3-205ENST00000487150 ZNF347Q96SE7 839 aa12.99□□□□□ -0.33
LIMS3-205ENST00000487150 BTBD10Q9BSF8 475 aa12.99□□□□□ -0.33
LIMS3-205ENST00000487150 AMBRA1Q9C0C7 1298 aa12.99□□□□□ -0.33
LIMS3-205ENST00000487150 MALT1Q9UDY8 824 aa12.99□□□□□ -0.33
LIMS3-205ENST00000487150 A4GNTQ9UNA3 340 aa12.99□□□□□ -0.33
LIMS3-205ENST00000487150 FLNBO75369 2602 aaKnown RBP12.99□□□□□ -0.33
LIMS3-205ENST00000487150 DOCK7Q96N67 2140 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 A0A1W2PRQ8 180 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 SH3D21A4FU49 640 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 ENO4A6NNW6 628 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 ZNF814B7Z6K7 855 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 KPNA4O00629 521 aaPredicted RBP12.98□□□□□ -0.33
LIMS3-205ENST00000487150 FABP3P05413 133 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 H1F0P07305 194 aaKnown RBP12.98□□□□□ -0.33
LIMS3-205ENST00000487150 UMPSP11172 480 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 KLK2P20151 261 aa12.98□□□□□ -0.33
LIMS3-205ENST00000487150 COL8A1P27658 744 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms