RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 RPRD1AQ96P16 312 aaPredicted RBP4.63□□□□□ -1.67
RTN4-214ENST00000486085 QKIQ96PU8 341 aaKnown RBP eCLIP4.63□□□□□ -1.673e-7■□□□□ 8
RTN4-214ENST00000486085 PSKH2Q96QS6 385 aa4.63□□□□□ -1.67
RTN4-214ENST00000486085 XPO6Q96QU8 1125 aaKnown RBP4.63□□□□□ -1.67
RTN4-214ENST00000486085 MCCC1Q96RQ3 725 aaPredicted RBP4.63□□□□□ -1.67
RTN4-214ENST00000486085 APOOQ9BUR5 198 aa4.63□□□□□ -1.67
RTN4-214ENST00000486085 GOLPH3Q9H4A6 298 aa4.63□□□□□ -1.67
RTN4-214ENST00000486085 DUS2Q9NX74 493 aaKnown RBP4.63□□□□□ -1.67
RTN4-214ENST00000486085 C6orf203Q9P0P8 240 aaPredicted RBP4.63□□□□□ -1.67
RTN4-214ENST00000486085 CIDEBQ9UHD4 219 aa4.63□□□□□ -1.67
RTN4-214ENST00000486085 DUSP12Q9UNI6 340 aa4.63□□□□□ -1.67
RTN4-214ENST00000486085 MFHAS1Q9Y4C4 1052 aa4.63□□□□□ -1.67
RTN4-214ENST00000486085 MMP24Q9Y5R2 645 aa4.63□□□□□ -1.67
RTN4-214ENST00000486085 SMAD5-AS1Q9Y6J3 95 aa4.63□□□□□ -1.67
RTN4-214ENST00000486085 TRIOO75962 3097 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 NUP205Q92621 2012 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 TRAV9-2A0A087WT02 112 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 A0A0J9YVX5 310 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 A0A1W2PQ67 120 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 TRABD2BA6NFA1 517 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 C10orf142B7Z368 130 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 WASH3PC4AMC7 463 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 ALOX15BO15296 676 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 BCL2L11O43521 198 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 CST8O60676 142 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 SRPX2O60687 465 aaPredicted RBP4.62□□□□□ -1.67
RTN4-214ENST00000486085 E2F6O75461 281 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 FGGP02679 453 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 SFTPCP11686 197 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 RPS2P15880 293 aaKnown RBP4.62□□□□□ -1.67
RTN4-214ENST00000486085 OR1E1P30953 314 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 OPRD1P41143 372 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 MAGEA8P43361 318 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 SGSHP51688 502 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 ARHGDIAP52565 204 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 IST1P53990 364 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 STARD6P59095 220 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 RPS24P62847 133 aaKnown RBP4.62□□□□□ -1.67
RTN4-214ENST00000486085 CDK16Q00536 496 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 GNA12Q03113 381 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 ZNF239Q16600 458 aaKnown RBP4.62□□□□□ -1.67
RTN4-214ENST00000486085 SLC22A6Q4U2R8 563 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 SLC25A30Q5SVS4 291 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 LINC00242Q5T6M2 205 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 SPINK14Q6IE38 97 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 ADAMTSL5Q6ZMM2 481 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 AMZ2Q86W34 360 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 TMEM25Q86YD3 366 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 CDKL3Q8IVW4 592 aaPredicted RBP4.62□□□□□ -1.67
RTN4-214ENST00000486085 SLC22A18ASQ8N1D0 253 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 ALLCQ8N6M5 410 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 NPWQ8N729 165 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 SPATA4Q8NEY3 305 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 OR52J3Q8NH60 311 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 RHOXF1Q8NHV9 184 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 TYMSOSQ8TAI1 123 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 ACTL9Q8TC94 416 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 BRSK1Q8TDC3 778 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 C17orf50Q8WW18 174 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 ING5Q8WYH8 240 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 FAM131CQ96AQ9 280 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 FEM1AQ9BSK4 669 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 CALN1Q9BXU9 219 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 ALG9Q9H6U8 611 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 AMBNQ9NP70 447 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 CUTCQ9NTM9 273 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 ETNK2Q9NVF9 386 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 CLEC5AQ9NY25 188 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 GPR83Q9NYM4 423 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 SPASTQ9UBP0 616 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 BLOC1S6Q9UL45 172 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 VANGL2Q9ULK5 521 aa4.62□□□□□ -1.67
RTN4-214ENST00000486085 KLF2Q9Y5W3 355 aaPredicted RBP4.62□□□□□ -1.67
RTN4-214ENST00000486085 A0A0C4DFX4 3053 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 MYO10Q9HD67 2058 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 ZDBF2Q9HCK1 2354 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 GOLGA6L7A0A1B0GV03 622 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 TSPAN11A1L157 253 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 AP3B1O00203 1094 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 MFSD11O43934 449 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 ZNF253O75346 499 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 PDE5AO76074 875 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 KBTBD11O94819 623 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 ECDO95905 644 aaPredicted RBP4.61□□□□□ -1.67
RTN4-214ENST00000486085 CD160O95971 181 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 ETS1P14921 441 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 IL9P15248 144 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 HOXA6P31267 233 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 COILP38432 576 aaPredicted RBP4.61□□□□□ -1.67
RTN4-214ENST00000486085 RPS9P46781 194 aaKnown RBP4.61□□□□□ -1.67
RTN4-214ENST00000486085 NUMBP49757 651 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 RPL26P61254 145 aaKnown RBP4.61□□□□□ -1.67
RTN4-214ENST00000486085 MYBPC1Q00872 1141 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 OTUD4Q01804 1114 aaKnown RBP4.61□□□□□ -1.67
RTN4-214ENST00000486085 GBE1Q04446 702 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 LRRC74AQ0VAA2 488 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 MRPL28Q13084 256 aaKnown RBP4.61□□□□□ -1.67
RTN4-214ENST00000486085 LTB4RQ15722 352 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 CD226Q15762 336 aa4.61□□□□□ -1.67
RTN4-214ENST00000486085 TEX44Q53QW1 395 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms