RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 THY1P04216 161 aa15.28■□□□□ 0.04
VIM-205ENST00000485947 RYKP34925 604 aa15.28■□□□□ 0.04
VIM-205ENST00000485947 IFNGR2P38484 337 aa15.28■□□□□ 0.04
VIM-205ENST00000485947 RBM34P42696 430 aaKnown RBP15.28■□□□□ 0.04
VIM-205ENST00000485947 RAD23AP54725 363 aa15.28■□□□□ 0.04
VIM-205ENST00000485947 AQP4P55087 323 aa15.28■□□□□ 0.04
VIM-205ENST00000485947 B3GALT5-AS1P59052 145 aa15.28■□□□□ 0.04
VIM-205ENST00000485947 SORDQ00796 357 aa15.28■□□□□ 0.04
VIM-205ENST00000485947 OR5M10Q6IEU7 315 aa15.28■□□□□ 0.04
VIM-205ENST00000485947 PODNL1Q6PEZ8 512 aa15.28■□□□□ 0.04
VIM-205ENST00000485947 CHMP1BQ7LBR1 199 aa15.28■□□□□ 0.04
VIM-205ENST00000485947 RNF113BQ8IZP6 322 aaKnown RBP15.28■□□□□ 0.04
VIM-205ENST00000485947 MEIOBQ8N635 442 aa15.28■□□□□ 0.04
VIM-205ENST00000485947 ATG16L2Q8NAA4 619 aa15.28■□□□□ 0.04
VIM-205ENST00000485947 RELL2Q8NC24 303 aaPredicted RBP15.28■□□□□ 0.04
VIM-205ENST00000485947 ZNF563Q8TA94 476 aa15.28■□□□□ 0.04
VIM-205ENST00000485947 C1GALT1C1Q96EU7 318 aa15.28■□□□□ 0.04
VIM-205ENST00000485947 SH3YL1Q96HL8 342 aaPredicted RBP15.28■□□□□ 0.04
VIM-205ENST00000485947 PIGMQ9H3S5 423 aa15.28■□□□□ 0.04
VIM-205ENST00000485947 JKAMPQ9P055 326 aa15.28■□□□□ 0.04
VIM-205ENST00000485947 CLCF1Q9UBD9 225 aa15.28■□□□□ 0.04
VIM-205ENST00000485947 MGAT4BQ9UQ53 548 aa15.28■□□□□ 0.04
VIM-205ENST00000485947 MAGED1Q9Y5V3 778 aaPredicted RBP15.28■□□□□ 0.04
VIM-205ENST00000485947 AP4B1Q9Y6B7 739 aa15.28■□□□□ 0.04
VIM-205ENST00000485947 A0A087WUU8 490 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 C7orf72A4D263 438 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 CLCA1A8K7I4 914 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 LYPD3O95274 346 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 ADAP00813 363 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 TMIGD3P0DMS9 266 aaPredicted RBP15.27■□□□□ 0.04
VIM-205ENST00000485947 ZNF17P17021 662 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 CDH2P19022 906 aaPredicted RBP15.27■□□□□ 0.04
VIM-205ENST00000485947 HK1P19367 917 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 PRKACGP22612 351 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 KIR2DL3P43628 341 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 IDH2P48735 452 aaKnown RBP15.27■□□□□ 0.04
VIM-205ENST00000485947 DLX5P56178 289 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 MYBPHQ13203 477 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 LAPTM4AQ15012 233 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 ALG10BQ5I7T1 473 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 KDM4DQ6B0I6 523 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 RRM2BQ7LG56 351 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 NKAIN4Q8IVV8 208 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 CADM2Q8N3J6 435 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 OR4K5Q8NGD3 323 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 FAM222BQ8WU58 562 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 TMEM234Q8WY98 164 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 C3orf49Q96BT1 292 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 PRSS27Q9BQR3 290 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 ZNF556Q9HAH1 456 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 SMURF2Q9HAU4 748 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 SMPD3Q9NY59 655 aaPredicted RBP15.27■□□□□ 0.04
VIM-205ENST00000485947 MED11Q9P086 117 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 ENOPH1Q9UHY7 261 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 ZNF175Q9Y473 711 aa15.27■□□□□ 0.04
VIM-205ENST00000485947 OR10H3O60404 316 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 NUDT14O95848 222 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 PNMTP11086 282 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 FUT4P22083 530 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 CBLP22681 906 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 IGFBP5P24593 272 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 UQCRC1P31930 480 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 SLC1A3P43003 542 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 DAPP51397 102 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 UGT2B15P54855 530 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 SRYQ05066 204 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 SEC23BQ15437 767 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 TMEM44Q2T9K0 475 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 RAET1LQ5VY80 246 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 ZNF770Q6IQ21 691 aaPredicted RBP15.26■□□□□ 0.03
VIM-205ENST00000485947 ZNF730Q6ZMV8 503 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 MBOAT2Q6ZWT7 520 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 C9orf106Q8NAJ2 232 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 OR9Q2Q8NGE9 314 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 GPR119Q8TDV5 335 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 ST8SIA1Q92185 356 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 ZBTB8AQ96BR9 441 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 FEVQ99581 238 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 ZNF426Q9BUY5 554 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 DGCR6LQ9BY27 220 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 PAQR5Q9NXK6 330 aaPredicted RBP15.26■□□□□ 0.03
VIM-205ENST00000485947 TMEFF2Q9UIK5 374 aaPredicted RBP15.26■□□□□ 0.03
VIM-205ENST00000485947 RAB26Q9ULW5 256 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 EDARQ9UNE0 448 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 POFUT2Q9Y2G5 429 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 RPH3AQ9Y2J0 694 aaPredicted RBP15.26■□□□□ 0.03
VIM-205ENST00000485947 LRRC42Q9Y546 428 aa15.26■□□□□ 0.03
VIM-205ENST00000485947 A0A087WUJ7 227 aa15.25■□□□□ 0.03
VIM-205ENST00000485947 HTR3EA5X5Y0 456 aa15.25■□□□□ 0.03
VIM-205ENST00000485947 B4DXG7 233 aa15.25■□□□□ 0.03
VIM-205ENST00000485947 HTR3AP46098 478 aa15.25■□□□□ 0.03
VIM-205ENST00000485947 STARP49675 285 aa15.25■□□□□ 0.03
VIM-205ENST00000485947 RPS3AP61247 264 aaKnown RBP15.25■□□□□ 0.03
VIM-205ENST00000485947 DAZAP2Q15038 168 aaPredicted RBP15.25■□□□□ 0.03
VIM-205ENST00000485947 QPRTQ15274 297 aa15.25■□□□□ 0.03
VIM-205ENST00000485947 C1orf94Q6P1W5 598 aa15.25■□□□□ 0.03
VIM-205ENST00000485947 LINC00114Q6XXX2 140 aa15.25■□□□□ 0.03
VIM-205ENST00000485947 ATG4DQ86TL0 474 aaPredicted RBP15.25■□□□□ 0.03
VIM-205ENST00000485947 AQP11Q8NBQ7 271 aa15.25■□□□□ 0.03
VIM-205ENST00000485947 PIGXQ8TBF5 258 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms