RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ARL6IP1Q15041 203 aa3.48□□□□□ -1.85
VPS13A-211ENST00000484581 TGIF1Q15583 401 aa3.48□□□□□ -1.85
VPS13A-211ENST00000484581 KRT71Q3SY84 523 aa3.48□□□□□ -1.85
VPS13A-211ENST00000484581 AGBL2Q5U5Z8 902 aa3.48□□□□□ -1.85
VPS13A-211ENST00000484581 ZNF343Q6P1L6 599 aa3.48□□□□□ -1.85
VPS13A-211ENST00000484581 METTL7BQ6UX53 244 aa3.48□□□□□ -1.85
VPS13A-211ENST00000484581 Q6ZSR3 168 aa3.48□□□□□ -1.85
VPS13A-211ENST00000484581 NIPA1Q7RTP0 329 aa3.48□□□□□ -1.85
VPS13A-211ENST00000484581 PQLC3Q8N755 202 aa3.48□□□□□ -1.85
VPS13A-211ENST00000484581 STMN2Q93045 179 aa3.48□□□□□ -1.85
VPS13A-211ENST00000484581 NOL4LQ96MY1 436 aaPredicted RBP3.48□□□□□ -1.85
VPS13A-211ENST00000484581 GAL3ST1Q99999 423 aa3.48□□□□□ -1.85
VPS13A-211ENST00000484581 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.48□□□□□ -1.85
VPS13A-211ENST00000484581 MRPL22Q9NWU5 206 aaKnown RBP3.48□□□□□ -1.85
VPS13A-211ENST00000484581 LYARQ9NX58 379 aaKnown RBP3.48□□□□□ -1.85
VPS13A-211ENST00000484581 ZNF581Q9P0T4 197 aa3.48□□□□□ -1.85
VPS13A-211ENST00000484581 STAP1Q9ULZ2 295 aa3.48□□□□□ -1.85
VPS13A-211ENST00000484581 CFAP65Q6ZU64 1925 aaKnown RBP3.48□□□□□ -1.85
VPS13A-211ENST00000484581 SH3TC1Q8TE82 1336 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 SNED1Q8TER0 1413 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 CHST1O43916 411 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 SOX15O60248 233 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 OTCP00480 354 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 IGHV3-13P01766 116 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 FGF1P05230 155 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 RBMY1CP0DJD4 496 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 PGAM2P15259 253 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 STOMP27105 288 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 IST1P53990 364 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 BIDP55957 195 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 KRTAP10-12P60413 245 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 PAX5Q02548 391 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 PARP15Q460N3 678 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 SLC22A10Q63ZE4 541 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 DNM1P46Q6ZS02 220 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 ACOT7LQ6ZUV0 252 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 GPRIN3Q6ZVF9 776 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 MICU2Q8IYU8 434 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 CADM2Q8N3J6 435 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 FBXL16Q8N461 479 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 OR4K14Q8NGD5 310 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 OR52I1Q8NGK6 324 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 GPX8Q8TED1 209 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 PYROXD1Q8WU10 500 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 KIFAP3Q92845 792 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 SGK3Q96BR1 496 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 FGGYQ96C11 551 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 ZNF689Q96CS4 500 aaPredicted RBP3.47□□□□□ -1.85
VPS13A-211ENST00000484581 PAGE5Q96GU1 130 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 PRRC1Q96M27 445 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 RANBP9Q96S59 729 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 MRPL45Q9BRJ2 306 aaKnown RBP3.47□□□□□ -1.85
VPS13A-211ENST00000484581 RNF126Q9BV68 326 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 MFFQ9GZY8 342 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 TDRD3Q9H7E2 651 aaKnown RBP3.47□□□□□ -1.85
VPS13A-211ENST00000484581 FOLH1BQ9HBA9 442 aa3.47□□□□□ -1.85
VPS13A-211ENST00000484581 IGHV1OR15-1A0A075B7D0 117 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 NSG1A0A0A6YYJ2 146 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 IGHV3-35A0A0C4DH35 117 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 TUBAL3A6NHL2 446 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 HCRTR1O43613 425 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 ZNF254O75437 659 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 LGI1O95970 557 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 C2P06681 752 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 UBTFL1P0CB47 393 aaPredicted RBP3.46□□□□□ -1.86
VPS13A-211ENST00000484581 CPN2P22792 545 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 CASQ1P31415 396 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 SHMT2P34897 504 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 NSG1P42857 185 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 CXCL6P80162 114 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 MRPS22P82650 360 aaKnown RBP3.46□□□□□ -1.86
VPS13A-211ENST00000484581 LIPEQ05469 1076 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 PRR4Q16378 134 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 MRPL23Q16540 153 aaKnown RBP3.46□□□□□ -1.86
VPS13A-211ENST00000484581 AANATQ16613 207 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 NSUN5P1Q3KNT7 163 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 SLC22A6Q4U2R8 563 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 HIKESHIQ53FT3 197 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 PAN3Q58A45 887 aaKnown RBP3.46□□□□□ -1.86
VPS13A-211ENST00000484581 KLF17Q5JT82 389 aaPredicted RBP3.46□□□□□ -1.86
VPS13A-211ENST00000484581 C9orf135Q5VTT2 229 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 PLCXD3Q63HM9 321 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 OLFML2AQ68BL7 652 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 TWF2Q6IBS0 349 aaKnown RBP3.46□□□□□ -1.86
VPS13A-211ENST00000484581 WDR74Q6RFH5 385 aaPredicted RBP3.46□□□□□ -1.86
VPS13A-211ENST00000484581 CXCL17Q6UXB2 119 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 ARCQ7LC44 396 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 PPP1R27Q86WC6 154 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 NAXDQ8IW45 347 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 ZNF440Q8IYI8 595 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 FTMTQ8N4E7 242 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 MS4A15Q8N5U1 240 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 OR4A4PQ8NGN8 299 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 OR13F1Q8NGS4 319 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 GIMAP1Q8WWP7 306 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 PGLYRP4Q96LB8 373 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 C19orf24Q9BVV8 132 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 FAIM2Q9BWQ8 316 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 ANKRD60Q9BZ19 345 aa3.46□□□□□ -1.86
VPS13A-211ENST00000484581 BLZF1Q9H2G9 400 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms