RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 VANGL1Q8TAA9 524 aaPredicted RBP13.07□□□□□ -0.32
OPTN-210ENST00000482140 KTI12Q96EK9 354 aaPredicted RBP13.07□□□□□ -0.32
OPTN-210ENST00000482140 ZNF385AQ96PM9 386 aaKnown RBP13.07□□□□□ -0.32
OPTN-210ENST00000482140 EPYCQ99645 322 aa13.07□□□□□ -0.32
OPTN-210ENST00000482140 ARHGDIGQ99819 225 aa13.07□□□□□ -0.32
OPTN-210ENST00000482140 PTDSS2Q9BVG9 487 aa13.07□□□□□ -0.32
OPTN-210ENST00000482140 RNF115Q9Y4L5 304 aa13.07□□□□□ -0.32
OPTN-210ENST00000482140 ROS1P08922 2347 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 RAI1Q7Z5J4 1906 aaPredicted RBP13.06□□□□□ -0.32
OPTN-210ENST00000482140 A0A087WUJ7 227 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 A0A0B4J2E0 115 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 A0A1B0GX12 115 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 OR5H1A6NKK0 313 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 FTCDNL1E5RQL4 147 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 FXYD1O00168 92 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 FMO6PO60774 539 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 SMPD2O60906 423 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 PLAUP00749 431 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 ZNF43P17038 809 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 GZMMP51124 257 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 CDH12P55289 794 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 TGFBR3Q03167 851 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 MFSD13AQ14CX5 517 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 NRF1Q16656 503 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 NCMAPQ5T1S8 102 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 SWT1Q5T5J6 900 aaKnown RBP13.06□□□□□ -0.32
OPTN-210ENST00000482140 TSPO2Q5TGU0 170 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 C9orf135Q5VTT2 229 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 ZNF613Q6PF04 617 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 P3H2Q8IVL5 708 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 C10orf53Q8N6V4 93 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 POU5F2Q8N7G0 328 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 GPR32P1Q8NGA4 272 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 RP9Q8TA86 221 aaKnown RBP13.06□□□□□ -0.32
OPTN-210ENST00000482140 PROX1Q92786 737 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 TAAR8Q969N4 342 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 TAMM41Q96BW9 452 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 RCN3Q96D15 328 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 WFDC6Q9BQY6 131 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 NSRP1Q9H0G5 558 aaKnown RBP13.06□□□□□ -0.32
OPTN-210ENST00000482140 SLCO5A1Q9H2Y9 848 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 SLC7A10Q9NS82 523 aa13.06□□□□□ -0.32
OPTN-210ENST00000482140 CPSF4LA6NMK7 179 aaKnown RBP13.05□□□□□ -0.32
OPTN-210ENST00000482140 M0R082 166 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 HS3ST1O14792 307 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 TPST2O60704 377 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 ITGA5P08648 1049 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 NQO1P15559 274 aaKnown RBP13.05□□□□□ -0.32
OPTN-210ENST00000482140 CD247P20963 164 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 PTNP21246 168 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 CBLP22681 906 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 GRPRP30550 384 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 P2RY4P51582 365 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 BSPH1Q075Z2 132 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 C1DQ13901 141 aaKnown RBP13.05□□□□□ -0.32
OPTN-210ENST00000482140 ENTPD8Q5MY95 495 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 NIPAL3Q6P499 406 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 CREB3L2Q70SY1 520 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 CCDC80Q76M96 950 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 SPATA21Q7Z572 469 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 CALHM3Q86XJ0 350 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 KDM8Q8N371 416 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 ZIC4Q8N9L1 334 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 OR6T1Q8NGN1 323 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 OR52N5Q8NH56 324 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 ZNF417Q8TAU3 575 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 AKAP1Q92667 903 aaKnown RBP eCLIP13.05□□□□□ -0.32
OPTN-210ENST00000482140 ZNF587Q96SQ5 575 aaPredicted RBP13.05□□□□□ -0.32
OPTN-210ENST00000482140 PIP5K1AQ99755 562 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 ELAC2Q9BQ52 826 aaKnown RBP13.05□□□□□ -0.32
OPTN-210ENST00000482140 TMEM204Q9BSN7 226 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 ASPNQ9BXN1 380 aa13.05□□□□□ -0.32
OPTN-210ENST00000482140 IGKV1D-42A0A075B6H8 117 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 OR6C65A6NJZ3 312 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 FAM220BPB1ANY3 271 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 ZNF587BE7ETH6 402 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 ARHGEF9O43307 516 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 CHP2O43745 196 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 IFNA14P01570 189 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 COX4I1P13073 169 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 MPGP29372 298 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 FOXG1P55316 489 aaPredicted RBP13.04□□□□□ -0.32
OPTN-210ENST00000482140 CLDN17P56750 224 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 VEZF1Q14119 521 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 GABRA6Q16445 453 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 KLHL17Q6TDP4 642 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 KLHL24Q6TFL4 600 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 H1FNTQ75WM6 255 aaPredicted RBP13.04□□□□□ -0.32
OPTN-210ENST00000482140 ARPINQ7Z6K5 226 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 TGIF2LYQ8IUE0 185 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 C1orf162Q8NEQ5 155 aaPredicted RBP13.04□□□□□ -0.32
OPTN-210ENST00000482140 OR6S1Q8NH40 331 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 TMEM171Q8WVE6 324 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 OXGR1Q96P68 337 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 TMEM43Q9BTV4 400 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 FAM107BQ9H098 131 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 SEC14L4Q9UDX3 406 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 BAG5Q9UL15 447 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 B3GALT5Q9Y2C3 310 aa13.04□□□□□ -0.32
OPTN-210ENST00000482140 AP3M1Q9Y2T2 418 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms