RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 VPS35Q96QK1 796 aa5.43□□□□□ -1.54
CBX3-206ENST00000481057 TRAF4Q9BUZ4 470 aaPredicted RBP5.43□□□□□ -1.54
CBX3-206ENST00000481057 DEFB127Q9H1M4 99 aa5.43□□□□□ -1.54
CBX3-206ENST00000481057 MARCH7Q9H992 704 aa5.43□□□□□ -1.54
CBX3-206ENST00000481057 INTS9Q9NV88 658 aaKnown RBP5.43□□□□□ -1.54
CBX3-206ENST00000481057 HAO2Q9NYQ3 351 aa5.43□□□□□ -1.54
CBX3-206ENST00000481057 NKIRAS2Q9NYR9 191 aa5.43□□□□□ -1.54
CBX3-206ENST00000481057 SENP1Q9P0U3 644 aa5.43□□□□□ -1.54
CBX3-206ENST00000481057 EXTL2Q9UBQ6 330 aa5.43□□□□□ -1.54
CBX3-206ENST00000481057 AP1M2Q9Y6Q5 423 aa5.43□□□□□ -1.54
CBX3-206ENST00000481057 PRR14LQ5THK1 2151 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 TSPAN11A1L157 253 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 TRPC5OSA6NMA1 111 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 EEF1E1-BLOC1S5C9J1V9 151 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 BLOC1S5-TXNDC5H3BN57 136 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 POLR2DO15514 142 aaKnown RBP5.42□□□□□ -1.54
CBX3-206ENST00000481057 EEF1E1O43324 174 aaKnown RBP5.42□□□□□ -1.54
CBX3-206ENST00000481057 NME2P1O60361 137 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 NIPSNAP2O75323 286 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 CRTAPO75718 401 aaPredicted RBP5.42□□□□□ -1.54
CBX3-206ENST00000481057 SLC4A1P02730 911 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 AMBPP02760 352 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 DANCRP0C864 163 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 CFC1BP0CG36 223 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 CFC1P0CG37 223 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 ERVK-10P10266 1014 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 GFAPP14136 432 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 SLC6A6P31641 620 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 SOX6P35712 828 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 ATP5OP48047 213 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 SLC9A3P48764 834 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 CCR8P51685 355 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 CDH11P55287 796 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 OC90Q02509 493 aaPredicted RBP5.42□□□□□ -1.54
CBX3-206ENST00000481057 INCA1Q0VD86 236 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 RCN2Q14257 317 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 ACER2Q5QJU3 275 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 ERMARDQ5T6L9 678 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 ISCA2Q86U28 154 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 SLC38A6Q8IZM9 456 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 CCNYL1Q8N7R7 359 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 ZNF611Q8N823 705 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 TC2NQ8N9U0 490 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 OR1J1Q8NGS3 322 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 OR6S1Q8NH40 331 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 OR8K3Q8NH51 312 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 FGFBP3Q8TAT2 258 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 FBXO30Q8TB52 745 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 FANK1Q8TC84 345 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 AENQ8WTP8 325 aaKnown RBP5.42□□□□□ -1.54
CBX3-206ENST00000481057 RAPGEF5Q92565 580 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 BORCS5Q969J3 196 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 PLIN2Q99541 437 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 NAPGQ99747 312 aaPredicted RBP5.42□□□□□ -1.54
CBX3-206ENST00000481057 WNT5BQ9H1J7 359 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 LRRC19Q9H756 370 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 DCLRE1BQ9H816 532 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 SH2D2AQ9NP31 389 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 SLC52A3Q9NQ40 469 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 IARS2Q9NSE4 1012 aaKnown RBP5.42□□□□□ -1.54
CBX3-206ENST00000481057 PANK4Q9NVE7 773 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 DDX18Q9NVP1 670 aaKnown RBP5.42□□□□□ -1.54
CBX3-206ENST00000481057 HRASLS2Q9NWW9 162 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 TAB2Q9NYJ8 693 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 ZNF226Q9NYT6 803 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 ADAM22Q9P0K1 906 aa5.42□□□□□ -1.54
CBX3-206ENST00000481057 OR52A4PA6NMU1 304 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 EVPLLA8MZ36 301 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 PCDH7O60245 1069 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 OR2B3O76000 313 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 GUCA1CO95843 209 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 TRUB2O95900 331 aaKnown RBP5.41□□□□□ -1.54
CBX3-206ENST00000481057 FAM228BP0C875 321 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 OCM2P0CE71 109 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 OCMP0CE72 109 aaPredicted RBP5.41□□□□□ -1.54
CBX3-206ENST00000481057 PFKFB1P16118 471 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 SLC25A16P16260 332 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 STMN1P16949 149 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 USF1P22415 310 aaPredicted RBP5.41□□□□□ -1.54
CBX3-206ENST00000481057 LOXP28300 417 aaPredicted RBP5.41□□□□□ -1.54
CBX3-206ENST00000481057 TEAD1P28347 426 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 STARP49675 285 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 KPNA2P52292 529 aaKnown RBP5.41□□□□□ -1.54
CBX3-206ENST00000481057 STX1BP61266 288 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 NAA20P61599 178 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 CSNK2BP67870 215 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 COTL1Q14019 142 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 RBM39Q14498 530 aaKnown RBP5.41□□□□□ -1.54
CBX3-206ENST00000481057 NPTX1Q15818 432 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 C9orf152Q5JTZ5 239 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 KRBOX4Q5JUW0 171 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 HDDC2Q7Z4H3 204 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 ZER1Q7Z7L7 766 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 GPBP1Q86WP2 473 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 COMMD2Q86X83 199 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 MREGQ8N565 214 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 OR13J1Q8NGT2 312 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 GRPEL2Q8TAA5 225 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 MGARPQ8TDB4 240 aa5.41□□□□□ -1.54
CBX3-206ENST00000481057 GIPC3Q8TF64 312 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms