RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 IRF8Q02556 426 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 PDE7AQ13946 482 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 ZNF385BQ569K4 471 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 NKAPLQ5M9Q1 402 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 ZNF813Q6ZN06 617 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 OR1S2Q8NGQ3 325 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 OR5W2Q8NH69 310 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 WFDC5Q8TCV5 224 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 OSTF1Q92882 214 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 MYEOVQ96EZ4 313 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 OR1F2PQ96R84 312 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 FNDC11Q9BVV2 318 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 ASH2LQ9UBL3 628 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 DHCR7Q9UBM7 475 aaKnown RBP12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 A4GNTQ9UNA3 340 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 CYP8B1Q9UNU6 501 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 GPR52Q9Y2T5 361 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 CEP250Q9BV73 2442 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 NUP214P35658 2090 aaPredicted RBP12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 C9orf170A2RU37 121 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 UPK3BL1B0FP48 263 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 UPK3BL2E5RIL1 263 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 H0YIV9 168 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 J3QRE1 110 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 FGF16O43320 207 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 IFNGP01579 166 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 CD63P08962 238 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 EPXP11678 715 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 SNRPBP14678 240 aaKnown RBP12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 CBR1P16152 277 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 LAP3P28838 519 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 RBMS2Q15434 407 aaKnown RBP12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 SSX2Q16385 188 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 HEPHL1Q6MZM0 1159 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 UBE2R2Q712K3 238 aaPredicted RBP12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 PRSS45Q7RTY3 260 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 SLC36A1Q7Z2H8 476 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 IQCHQ86VS3 1027 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 GID4Q8IVV7 300 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 ACBD7Q8N6N7 88 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 ZSCAN1Q8NBB4 408 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 ABHD4Q8TB40 342 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 WDR89Q96FK6 387 aaPredicted RBP12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 ZNF607Q96SK3 696 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 MTERF1Q99551 399 aaKnown RBP12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 ADAT1Q9BUB4 502 aaKnown RBP12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 MAGEH1Q9H213 219 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 MVB12BQ9H7P6 319 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 ASF1BQ9NVP2 202 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 PILRBQ9UKJ0 227 aa12.11□□□□□ -0.47
CNKSR3-204ENST00000479339 GNG14A0A1W2PPG7 69 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 LRIT2A6NDA9 550 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 E9PI62 339 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 NPIPB9F8W1W9 429 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 TERTO14746 1132 aaKnown RBP12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 SLC16A5O15375 505 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 FLRT2O43155 660 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 TXNL1O43396 289 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 VEGFDO43915 354 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 IGLV3-19P01714 112 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 IGHV2-5P01817 119 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 RCC1P18754 421 aaPredicted RBP12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 ATF1P18846 271 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 TACR2P21452 398 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 ACHEP22303 614 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 UQCRC2P22695 453 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 CERS1P27544 350 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 CD70P32970 193 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 RPS24P62847 133 aaKnown RBP12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 SORDQ00796 357 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 ZNF763Q0D2J5 394 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 ILF3Q12906 894 aaKnown RBP eCLIP12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 FNDC3BQ53EP0 1204 aaKnown RBP12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 ATXN7L2Q5T6C5 722 aaPredicted RBP12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 C18orf63Q68DL7 685 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 RAB12Q6IQ22 244 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 JMJD6Q6NYC1 403 aaPredicted RBP12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 SERPINA13PQ6UXR4 307 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 IL34Q6ZMJ4 242 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 FAM83HQ6ZRV2 1179 aaPredicted RBP12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 ABHD13Q7L211 337 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 ZNF546Q86UE3 836 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 POMGNT2Q8NAT1 580 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 MORN4Q8NDC4 146 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 OR4K1Q8NGD4 311 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 STK35Q8TDR2 534 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 CYB5D2Q8WUJ1 264 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 PPCDCQ96CD2 204 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 WDR77Q9BQA1 342 aaPredicted RBP12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 ALG8Q9BVK2 526 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 TEX101Q9BY14 249 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 PLA2G12AQ9BZM1 189 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 KLHL31Q9H511 634 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 FBRSQ9HAH7 460 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 H2AFY2Q9P0M6 372 aaPredicted RBP12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 THADAQ6YHU6 1953 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 ABCA7Q8IZY2 2146 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 WDR87Q6ZQQ6 2873 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 TRBV5-4A0A0C4DH59 114 aa12.1□□□□□ -0.47
CNKSR3-204ENST00000479339 LNP1A1A4G5 178 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms