RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 GRPRP30550 384 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 H3F3AP84243 136 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 FAM27E3Q08E93 113 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 FBXL19-AS1Q494R0 122 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 FAM69AQ5T7M9 428 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 TMEM225Q6GV28 225 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 TTC33Q6PID6 262 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-215ENST00000478531 ZNF474Q6S9Z5 364 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-215ENST00000478531 C5orf46Q6UWT4 87 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 CASP12Q6UXS9 341 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 CYP2R1Q6VVX0 501 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 GALNT5Q7Z7M9 940 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 DMRTC2Q8IXT2 367 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-215ENST00000478531 ZNF100Q8IYN0 542 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 KDM8Q8N371 416 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 MFSD8Q8NHS3 518 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 ZNF417Q8TAU3 575 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 TMEM255BQ8WV15 326 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 CLPTM1LQ96KA5 538 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 PRRC1Q96M27 445 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 NSMCE2Q96MF7 247 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 MOGAT1Q96PD6 335 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 ZNF587Q96SQ5 575 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-215ENST00000478531 AMBRA1Q9C0C7 1298 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 KLHL4Q9C0H6 718 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 BCO1Q9HAY6 547 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 DCAF13Q9NV06 445 aaKnown RBP6.13□□□□□ -1.43
BRCA1-215ENST00000478531 RIMS3Q9UJD0 308 aa6.13□□□□□ -1.43
BRCA1-215ENST00000478531 SAMD4AQ9UPU9 718 aaKnown RBP6.13□□□□□ -1.43
BRCA1-215ENST00000478531 NOSIPQ9Y314 301 aaKnown RBP6.13□□□□□ -1.43
BRCA1-215ENST00000478531 ROS1P08922 2347 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 TUBAL3A6NHL2 446 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 ZNF724A8MTY0 619 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 FTCDNL1E5RQL4 147 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 hCG_2039718K7EN88 272 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 OR2T1O43869 369 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 SERPINI2O75830 405 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 OR5F1O95221 314 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 LYPD3O95274 346 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 UMPSP11172 480 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 IGFBP2P18065 325 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 EDNRAP25101 427 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 CD79BP40259 229 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 KIR2DL3P43628 341 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 SLC17A1Q14916 467 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 TFAP2EQ6VUC0 442 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 KIF18BQ86Y91 864 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 NKAIN4Q8IVV8 208 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 UBE2J2Q8N2K1 259 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 OR9K2Q8NGE7 335 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 PFN4Q8NHR9 129 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 LINC01560Q8TB33 94 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 MPP4Q96JB8 637 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 TACO1Q9BSH4 297 aaKnown RBP6.12□□□□□ -1.43
BRCA1-215ENST00000478531 TMEM43Q9BTV4 400 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 THTPAQ9BU02 230 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 FNDC11Q9BVV2 318 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 ASPNQ9BXN1 380 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 ENKD1Q9H0I2 346 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 GP6Q9HCN6 339 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 PLSCR4Q9NRQ2 329 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 TAS2R1Q9NYW7 299 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 CRIM1Q9NZV1 1036 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 PRSS50Q9UI38 385 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 FOXD3Q9UJU5 478 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-215ENST00000478531 FLVCR1Q9Y5Y0 555 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 PDZD2O15018 2839 aa6.12□□□□□ -1.43
BRCA1-215ENST00000478531 IGKV3D-15A0A087WSY6 115 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 GPR171O14626 319 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 GYG2O15488 501 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 PIP5K1CO60331 668 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 MRPL33O75394 65 aaKnown RBP6.11□□□□□ -1.43
BRCA1-215ENST00000478531 DIRAS1O95057 198 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 CH25HO95992 272 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 BGLAPP02818 100 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 ATP6V1B2P21281 511 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 FUT4P22083 530 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 CCKARP32238 428 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 IFNA8P32881 189 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 UGT2B10P36537 528 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 P2RY4P51582 365 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 SLC16A1P53985 500 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 UGT2B15P54855 530 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 SORDQ00796 357 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 ST3GAL3Q11203 375 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 TSC22D1Q15714 1073 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 ANKRD34AQ69YU3 496 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 ALKBH2Q6NS38 261 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 BEND4Q6ZU67 534 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 CYP4Z1Q86W10 505 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 CXorf67Q86X51 503 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-215ENST00000478531 ZNF454Q8N9F8 522 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 TMEM239Q8WW34 195 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 APH1AQ96BI3 265 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 ZC3HAV1LQ96H79 300 aaKnown RBP6.11□□□□□ -1.43
BRCA1-215ENST00000478531 PRSS27Q9BQR3 290 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 MED18Q9BUE0 208 aa6.11□□□□□ -1.43
BRCA1-215ENST00000478531 POLR2J2Q9GZM3 115 aaKnown RBP6.11□□□□□ -1.43
BRCA1-215ENST00000478531 POLR2J3Q9H1A7 115 aaKnown RBP6.11□□□□□ -1.43
BRCA1-215ENST00000478531 GORASP2Q9H8Y8 452 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms