RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 RLIMQ9NVW2 624 aa11.32□□□□□ -0.6
ABCF3-212ENST00000478288 THUMPD1Q9NXG2 353 aaKnown RBP11.32□□□□□ -0.6
ABCF3-212ENST00000478288 MOKQ9UQ07 419 aa11.32□□□□□ -0.6
ABCF3-212ENST00000478288 RCE1Q9Y256 329 aa11.32□□□□□ -0.6
ABCF3-212ENST00000478288 RASD1Q9Y272 281 aa11.32□□□□□ -0.6
ABCF3-212ENST00000478288 TRPC5OSA6NMA1 111 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 TMEM229AB2RXF0 380 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 RPL36A-HNRNPH2H7BZ11 118 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 HDAC3O15379 428 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 IGKV3-15P01624 115 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 CRYAAP02489 173 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 TFPTP0C1Z6 253 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 IDO1P14902 403 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 BGNP21810 368 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 SERPINF1P36955 418 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 PPOXP50336 477 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 LARS2Q15031 903 aaKnown RBP11.31□□□□□ -0.6
ABCF3-212ENST00000478288 C1orf140Q5VVS0 124 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 TMEM225Q6GV28 225 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 FAM166AQ6J272 317 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 MSANTD1Q6ZTZ1 278 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 NUP37Q8NFH4 326 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 OR4F15Q8NGB8 312 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 OR52P1PQ8NH57 321 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 MFSD8Q8NHS3 518 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 BCL2L2Q92843 193 aaPredicted RBP11.31□□□□□ -0.6
ABCF3-212ENST00000478288 FBXO17Q96EF6 278 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 AURKBQ96GD4 344 aaPredicted RBP11.31□□□□□ -0.6
ABCF3-212ENST00000478288 ALKBH3Q96Q83 286 aaPredicted RBP11.31□□□□□ -0.6
ABCF3-212ENST00000478288 ARMC7Q9H6L4 198 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 PNPOQ9NVS9 261 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 KCNS2Q9ULS6 477 aa11.31□□□□□ -0.6
ABCF3-212ENST00000478288 ZNF443Q9Y2A4 671 aaPredicted RBP11.31□□□□□ -0.6
ABCF3-212ENST00000478288 SLCO1B7G3V0H7 640 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 KRT33AO76009 404 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 LY6HO94772 140 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 LGI1O95970 557 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 GSNP06396 782 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 GKN3PP0CG01 181 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 SRD5A1P18405 259 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 IGFBP5P24593 272 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 SELENOPP49908 381 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 NME5P56597 212 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 UBE2NP61088 152 aaKnown RBP11.3□□□□□ -0.6
ABCF3-212ENST00000478288 NAAAQ02083 359 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 MPP2Q14168 576 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 PDCD4Q53EL6 469 aaKnown RBP11.3□□□□□ -0.6
ABCF3-212ENST00000478288 PRAMEF8Q5VWM4 474 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 PRAMEF7Q5VXH5 474 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 ANKRD16Q6P6B7 361 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 C6orf89Q6UWU4 347 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 CROCCP2Q86T23 111 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 VRK2Q86Y07 508 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 EPHX4Q8IUS5 362 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 CADM2Q8N3J6 435 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 PNPT1Q8TCS8 783 aaKnown RBP11.3□□□□□ -0.6
ABCF3-212ENST00000478288 SLC38A5Q8WUX1 472 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 C3orf49Q96BT1 292 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 MAELQ96JY0 434 aaKnown RBP11.3□□□□□ -0.6
ABCF3-212ENST00000478288 PRR14Q9BWN1 585 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 SPATA9Q9BWV2 254 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 NELFAQ9H3P2 528 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 PLK3Q9H4B4 646 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 ZNF442Q9H7R0 627 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 C12orf10Q9HB07 376 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 THAP1Q9NVV9 213 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 ADPRHL2Q9NX46 363 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 ZNF232Q9UNY5 417 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 IFT52Q9Y366 437 aa11.3□□□□□ -0.6
ABCF3-212ENST00000478288 A0A0G2JPF8 293 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 HNRNPCL2B2RXH8 293 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 HNRNPCL3B7ZW38 293 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 FTCDNL1E5RQL4 147 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 KLF11O14901 512 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 HNRNPCL1O60812 293 aaKnown RBP11.29□□□□□ -0.6
ABCF3-212ENST00000478288 SNNO75324 88 aaPredicted RBP11.29□□□□□ -0.6
ABCF3-212ENST00000478288 SLC22A3O75751 556 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 BCHEP06276 602 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 CECR9P0C854 216 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 HNRNPCL4P0DMR1 293 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 ETFAP13804 333 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 ZNF23P17027 643 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 CDH2P19022 906 aaPredicted RBP11.29□□□□□ -0.6
ABCF3-212ENST00000478288 HNF1AP20823 631 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 GIFP27352 417 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 EPHA3P29320 983 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 DSTNP60981 165 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 GGTLC2Q14390 218 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 ADIPOQQ15848 244 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 KRTAP24-1Q3LI83 254 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 C5orf46Q6UWT4 87 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 LINGO2Q7L985 606 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 SLC46A3Q7Z3Q1 461 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 MSI2Q96DH6 328 aaKnown RBP11.29□□□□□ -0.6
ABCF3-212ENST00000478288 RMND5AQ9H871 391 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 TPT1P8Q9HAU6 139 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 CACYBPQ9HB71 228 aaKnown RBP11.29□□□□□ -0.6
ABCF3-212ENST00000478288 SDR39U1Q9NRG7 319 aaPredicted RBP11.29□□□□□ -0.6
ABCF3-212ENST00000478288 SLC6A13Q9NSD5 602 aa11.29□□□□□ -0.6
ABCF3-212ENST00000478288 ZIM2Q9NZV7 527 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms