RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 PRSS27Q9BQR3 290 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 ENKD1Q9H0I2 346 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 GP6Q9HCN6 339 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 PLSCR4Q9NRQ2 329 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 DCAF13Q9NV06 445 aaKnown RBP9.12□□□□□ -0.95
HDAC6-222ENST00000478095 TAS2R1Q9NYW7 299 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 EMC3Q9P0I2 261 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 RIMS3Q9UJD0 308 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 RPS6KA6Q9UK32 745 aa9.12□□□□□ -0.95
HDAC6-222ENST00000478095 NOSIPQ9Y314 301 aaKnown RBP9.12□□□□□ -0.95
HDAC6-222ENST00000478095 ADGRG4Q8IZF6 3080 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 PHF3Q92576 2039 aaKnown RBP9.11□□□□□ -0.95
HDAC6-222ENST00000478095 IGKV3D-15A0A087WSY6 115 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 CYSRT1A8MQ03 144 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 ZNF724A8MTY0 619 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 hCG_2039718K7EN88 272 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 M0R082 166 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 HNRNPRO43390 633 aaKnown RBP9.11□□□□□ -0.95
HDAC6-222ENST00000478095 OR2T1O43869 369 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 OR5F1O95221 314 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 BGLAPP02818 100 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 PRF1P14222 555 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 POU2F1P14859 743 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 ATP6V1B2P21281 511 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 GRPRP30550 384 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 CCKARP32238 428 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 NTF4P34130 210 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 CD79BP40259 229 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 P2RY4P51582 365 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 IL1RL1Q01638 556 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 SLC17A1Q14916 467 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 PDK3Q15120 406 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 FXNQ16595 210 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 TMEM225Q6GV28 225 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 TTC33Q6PID6 262 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-222ENST00000478095 C5orf46Q6UWT4 87 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 CASP12Q6UXS9 341 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 CYP2R1Q6VVX0 501 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 LINC00114Q6XXX2 140 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 GALNT5Q7Z7M9 940 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 STK32CQ86UX6 486 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 DMRTC2Q8IXT2 367 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-222ENST00000478095 ZNF100Q8IYN0 542 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 KDM8Q8N371 416 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 ACBD4Q8NC06 268 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 OR9K2Q8NGE7 335 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 PFN4Q8NHR9 129 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 ZNF417Q8TAU3 575 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 LINC01560Q8TB33 94 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 CCDC124Q96CT7 223 aaKnown RBP9.11□□□□□ -0.95
HDAC6-222ENST00000478095 MPP4Q96JB8 637 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 ZNF385AQ96PM9 386 aaKnown RBP9.11□□□□□ -0.95
HDAC6-222ENST00000478095 ZNF587Q96SQ5 575 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-222ENST00000478095 TACO1Q9BSH4 297 aaKnown RBP9.11□□□□□ -0.95
HDAC6-222ENST00000478095 TMEM43Q9BTV4 400 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 KLHL4Q9C0H6 718 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 GORASP2Q9H8Y8 452 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 CRIM1Q9NZV1 1036 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 PRSS50Q9UI38 385 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 FOXD3Q9UJU5 478 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-222ENST00000478095 A4GNTQ9UNA3 340 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 SAMD4AQ9UPU9 718 aaKnown RBP9.11□□□□□ -0.95
HDAC6-222ENST00000478095 FLVCR1Q9Y5Y0 555 aa9.11□□□□□ -0.95
HDAC6-222ENST00000478095 TUBAL3A6NHL2 446 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 ENO4A6NNW6 628 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 GPR171O14626 319 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 FFAR1O14842 300 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 PIP5K1CO60331 668 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 DIRAS1O95057 198 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 CH25HO95992 272 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 NQO1P15559 274 aaKnown RBP9.1□□□□□ -0.95
HDAC6-222ENST00000478095 KIR2DL3P43628 341 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 OR3A2P47893 321 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 SLC16A1P53985 500 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 UGT2B15P54855 530 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 TSC22D1Q15714 1073 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 ANKRD34AQ69YU3 496 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 TSEN54Q7Z6J9 526 aaKnown RBP9.1□□□□□ -0.95
HDAC6-222ENST00000478095 KIF18BQ86Y91 864 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 UBE2J2Q8N2K1 259 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 TMEM239Q8WW34 195 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 APH1AQ96BI3 265 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 THTPAQ9BU02 230 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 ZNF426Q9BUY5 554 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 FNDC11Q9BVV2 318 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 ASPNQ9BXN1 380 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 POLR2J2Q9GZM3 115 aaKnown RBP9.1□□□□□ -0.95
HDAC6-222ENST00000478095 POLR2J3Q9H1A7 115 aaKnown RBP9.1□□□□□ -0.95
HDAC6-222ENST00000478095 MEPEQ9NQ76 525 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-222ENST00000478095 C20orf141Q9NUB4 165 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 ELOVL5Q9NYP7 299 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 PRPF19Q9UMS4 504 aaKnown RBP9.1□□□□□ -0.95
HDAC6-222ENST00000478095 RASD1Q9Y272 281 aa9.1□□□□□ -0.95
HDAC6-222ENST00000478095 C16orf97H3BN30 126 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 GYG2O15488 501 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 MRPL33O75394 65 aaKnown RBP9.09□□□□□ -0.95
HDAC6-222ENST00000478095 SERPINI2O75830 405 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 HPRP00739 348 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 ADAP00813 363 aa9.09□□□□□ -0.95
HDAC6-222ENST00000478095 UMPSP11172 480 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms