RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 PDLIM4P50479 330 aa11.4□□□□□ -0.58
MRPL55-228ENST00000476267 NAAAQ02083 359 aa11.4□□□□□ -0.58
MRPL55-228ENST00000476267 EGR4Q05215 589 aa11.4□□□□□ -0.58
MRPL55-228ENST00000476267 EFNB3Q15768 340 aa11.4□□□□□ -0.58
MRPL55-228ENST00000476267 LIN52Q52LA3 116 aa11.4□□□□□ -0.58
MRPL55-228ENST00000476267 C1orf140Q5VVS0 124 aa11.4□□□□□ -0.58
MRPL55-228ENST00000476267 KLHL24Q6TFL4 600 aa11.4□□□□□ -0.58
MRPL55-228ENST00000476267 ABHD12BQ7Z5M8 362 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-228ENST00000476267 GPAT4Q86UL3 456 aa11.4□□□□□ -0.58
MRPL55-228ENST00000476267 MYPOPQ86VE0 399 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-228ENST00000476267 PEX5LQ8IYB4 626 aa11.4□□□□□ -0.58
MRPL55-228ENST00000476267 CLIP4Q8N3C7 705 aa11.4□□□□□ -0.58
MRPL55-228ENST00000476267 GLB1L3Q8NCI6 653 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-228ENST00000476267 SLC38A5Q8WUX1 472 aa11.4□□□□□ -0.58
MRPL55-228ENST00000476267 MAELQ96JY0 434 aaKnown RBP11.4□□□□□ -0.58
MRPL55-228ENST00000476267 ZNF317Q96PQ6 595 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-228ENST00000476267 ALKBH3Q96Q83 286 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-228ENST00000476267 SOX7Q9BT81 388 aa11.4□□□□□ -0.58
MRPL55-228ENST00000476267 RSPO3Q9BXY4 272 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-228ENST00000476267 LINC00470Q9BZP3 86 aa11.4□□□□□ -0.58
MRPL55-228ENST00000476267 SHARPINQ9H0F6 387 aa11.4□□□□□ -0.58
MRPL55-228ENST00000476267 PLK3Q9H4B4 646 aa11.4□□□□□ -0.58
MRPL55-228ENST00000476267 WDR55Q9H6Y2 383 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-228ENST00000476267 TMEM45AQ9NWC5 275 aa11.4□□□□□ -0.58
MRPL55-228ENST00000476267 P2RX2Q9UBL9 471 aa11.4□□□□□ -0.58
MRPL55-228ENST00000476267 ZNF443Q9Y2A4 671 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-228ENST00000476267 FKBP7Q9Y680 259 aa11.4□□□□□ -0.58
MRPL55-228ENST00000476267 A0A096LPI6 279 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 LOC390937A0A1W2PQ73 354 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 ZNF587BE7ETH6 402 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 RPL36A-HNRNPH2H7BZ11 118 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 NR5A2O00482 541 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 SNNO75324 88 aaPredicted RBP11.39□□□□□ -0.59
MRPL55-228ENST00000476267 KRT75O95678 551 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 BCHEP06276 602 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 IGFBP1P08833 259 aaPredicted RBP11.39□□□□□ -0.59
MRPL55-228ENST00000476267 CECR9P0C854 216 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 EPHA3P29320 983 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 SERPINF1P36955 418 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 PPOXP50336 477 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 SNRPD2P62316 118 aaKnown RBP11.39□□□□□ -0.59
MRPL55-228ENST00000476267 GTDC1Q4AE62 458 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 PDCD4Q53EL6 469 aaKnown RBP11.39□□□□□ -0.59
MRPL55-228ENST00000476267 RPS26P11Q5JNZ5 115 aaPredicted RBP11.39□□□□□ -0.59
MRPL55-228ENST00000476267 FAM120AOSQ5T036 256 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 FAM166AQ6J272 317 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 ANKRD16Q6P6B7 361 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 SERPINA11Q86U17 422 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 CADM2Q8N3J6 435 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 FAM169BQ8N8A8 192 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 ANKS4BQ8N8V4 417 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 VPS33AQ96AX1 596 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 PIMREGQ9BSJ6 248 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 TAPBPLQ9BX59 468 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 MYOZ1Q9NP98 299 aaPredicted RBP11.39□□□□□ -0.59
MRPL55-228ENST00000476267 ADPRHL2Q9NX46 363 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 CALML5Q9NZT1 146 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 B3GAT1Q9P2W7 334 aa11.39□□□□□ -0.59
MRPL55-228ENST00000476267 HEATR1Q9H583 2144 aaKnown RBP11.39□□□□□ -0.59
MRPL55-228ENST00000476267 ZNF503-AS2A6NEH8 195 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 OR6C65A6NJZ3 312 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 B9A039 149 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 RFXANKO14593 260 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 HDAC3O15379 428 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 CRYAAP02489 173 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 IL6P05231 212 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 OR4A8P0C604 315 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 PNMTP11086 282 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 HOXB9P17482 250 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-228ENST00000476267 CRISP3P54108 245 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 WDR4P57081 412 aaKnown RBP11.38□□□□□ -0.59
MRPL55-228ENST00000476267 TUBA1BP68363 451 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 TUBA4AP68366 448 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 HGFACQ04756 655 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 GGTLC2Q14390 218 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 ZSWIM7Q19AV6 140 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 PRAMEF8Q5VWM4 474 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 PRAMEF7Q5VXH5 474 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 TMEM225Q6GV28 225 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 NIPAL3Q6P499 406 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 C6orf89Q6UWU4 347 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 IL17RELQ6ZVW7 336 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 TUBA1AQ71U36 451 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 ANKK1Q8NFD2 765 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 NUP37Q8NFH4 326 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 MFSD8Q8NHS3 518 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 STK35Q8TDR2 534 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 TMEM19Q96HH6 336 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 FOXN4Q96NZ1 517 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 SPATA9Q9BWV2 254 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 TPT1P8Q9HAU6 139 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 SEC14L4Q9UDX3 406 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 KCNS2Q9ULS6 477 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 RASD1Q9Y272 281 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 MALRD1Q5VYJ5 2156 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 ALPK2Q86TB3 2170 aa11.38□□□□□ -0.59
MRPL55-228ENST00000476267 A0A0G2JPF8 293 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 LOC100289279A0A1B0GTE1 492 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 HNRNPCL2B2RXH8 293 aa11.37□□□□□ -0.59
MRPL55-228ENST00000476267 HNRNPCL3B7ZW38 293 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms