RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, human

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-215	ENST00000474539	MAP4K2	Q12851	820 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	OR1Q1	Q15612	314 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	FXN	Q16595	210 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	ISX	Q2M1V0	245 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	RUNDC3A	Q59EK9	446 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	ACSM5	Q6NUN0	579 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	TMEM205	Q6UW68	189 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	NHLRC1	Q6VVB1	395 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	DOK3	Q7L591	496 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	STX12	Q86Y82	276 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	C17orf47	Q8NEP4	570 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	OR56B1	Q8NGI3	324 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	OR6S1	Q8NH40	331 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	CDS1	Q92903	461 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	MS4A6E	Q96DS6	147 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	C16orf58	Q96GQ5	468 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	C3orf30	Q96M34	536 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	ZNF300	Q96RE9	604 aa	Predicted RBP	4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	SLCO5A1	Q9H2Y9	848 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	MTG2	Q9H4K7	406 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	METTL8	Q9H825	291 aa	Known RBP	4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	TP53TG5	Q9Y2B4	290 aa		4.27	□□□□□ -1.73
CCNL1-215	ENST00000474539	BRWD3	Q6RI45	1802 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	FABP12	A6NFH5	140 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	PLOD2	O00469	737 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	DLGAP1	O14490	977 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	OR7A10	O76100	309 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	CD14	P08571	375 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	NAT2	P11245	290 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	ZNF17	P17021	662 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	DNASE1	P24855	282 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	CDKN2C	P42773	168 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	RAC1	P63000	192 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	PUDP	Q08623	228 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	RPL22L1	Q6P5R6	122 aa	Known RBP	4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	MBOAT2	Q6ZWT7	520 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	FCRLA	Q7L513	359 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	GDPD3	Q7L5L3	318 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	BNIPL	Q7Z465	357 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	KLB	Q86Z14	1044 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	OR5H2	Q8NGV7	314 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	HBEGF	Q99075	208 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	TXLNGY	Q9BZA5	131 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	PAIP1	Q9H074	479 aa	Known RBP	4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	GSTO2	Q9H4Y5	243 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	MBNL1	Q9NR56	388 aa	Known RBP	4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	SLC22A11	Q9NSA0	550 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	ZNF224	Q9NZL3	707 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	OR2A25	A4D2G3	310 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	FAM25E	A8MYX2	175 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	AHRR	A9YTQ3	701 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	CLDN25	C9JDP6	229 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	TPST2	O60704	377 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	FURIN	P09958	794 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	OR2T7	P0C7T2	308 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	LAMP1	P11279	417 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	ARRB2	P32121	409 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	SIRPA	P78324	504 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	BNIP3	Q12983	259 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	GALE	Q14376	348 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	KCTD21	Q4G0X4	260 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	FAM71E1	Q6IPT2	247 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	LACC1	Q8IV20	430 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	OR2T27	Q8NH04	317 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	ZNF420	Q8TAQ5	688 aa	Predicted RBP	4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	ZFP90	Q8TF47	636 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	DUSP19	Q8WTR2	217 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	ADAMTS14	Q8WXS8	1223 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	KCTD12	Q96CX2	325 aa	Known RBP	4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	APIP	Q96GX9	242 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	BCL2L10	Q9HD36	194 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	EXOSC3	Q9NQT5	275 aa	Known RBP	4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	SH3BGRL2	Q9UJC5	107 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	FBXO7	Q9Y3I1	522 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	ATG4B	Q9Y4P1	393 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	NRXN2	Q9P2S2	1712 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539		A0A1W2PQ09	198 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539		A0A1W2PQD3	144 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	SH2D7	A6NKC9	451 aa	Predicted RBP	4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	ZNF850	A8MQ14	1090 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	WBP4	O75554	376 aa	Known RBP	4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	CD53	P19397	219 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	CXCR4	P61073	352 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	LRRC10	Q5BKY1	277 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	AWAT2	Q6E213	333 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	SLC22A25	Q6T423	547 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	CBLL1	Q75N03	491 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	UTS2B	Q765I0	119 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	SLC35D2	Q76EJ3	337 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	ZNF551	Q7Z340	670 aa	Predicted RBP	4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	PXK	Q7Z7A4	578 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	SLCO6A1	Q86UG4	719 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	NRM	Q8IXM6	262 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	MUC20	Q8N307	709 aa	Predicted RBP	4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	ZNF611	Q8N823	705 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	TCEANC	Q8N8B7	351 aa		4.26	□□□□□ -1.73
CCNL1-215	ENST00000474539	BOLL	Q8N9W6	283 aa	Known RBP	4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms