RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 ASB3Q9Y575 518 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 AKAP6Q13023 2319 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 LRRK2Q5S007 2527 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 USF3Q68DE3 2245 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 PLECQ15149 4684 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 IGSF10Q6WRI0 2623 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 EPG5Q9HCE0 2579 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 DSCAML1Q8TD84 2053 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 DNAH7Q8WXX0 4024 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ANKHD1Q8IWZ3 2542 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ABCA4P78363 2273 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ACACBO00763 2458 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 TANC2Q9HCD6 1990 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 LOC100509620A0A075B734 347 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 LOC100653049A0A140TA62 436 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 hCG_1809904A0A1W2PP81 198 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 A0A1W2PPE2 198 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 A0A1W2PR64 198 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 RGSL1A5PLK6 1076 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 PRORSD1PA6NEY8 169 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 NCF1BA6NI72 391 aaPredicted RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 VGLL3A8MV65 326 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 NCF1CA8MVU1 366 aaPredicted RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ARHGEF33A8MVX0 844 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 SNURFLB1AK76 121 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 C10orf142B7Z368 130 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 C4orf51C9J302 202 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 E5RI56 91 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 SPECC1L-ADORA2AF8WAN1 911 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 H0YAE9 185 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 NME4O00746 187 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 PRMT5O14744 637 aaPredicted RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 AIM2O14862 343 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 CHUKO15111 745 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 LSM1O15116 133 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 STX7O15400 261 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 CCDC22O60826 627 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 SMIM24O75264 130 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 MTX2O75431 263 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 VPS26AO75436 327 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ATP5HO75947 161 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 KRT34O76011 436 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 SUPT7LO94864 414 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 OR4F21O95013 312 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 SLC25A14O95258 325 aaPredicted RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ETHE1O95571 254 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 GUCA1CO95843 209 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ATP5BP06576 529 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 CAPN1P07384 714 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 RBP1P09455 135 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 OR2T7P0C7T2 308 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 SMIM18P0DKX4 95 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 NR2F1P10589 423 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 NEFHP12036 1026 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 GFAPP14136 432 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 NCF1P14598 390 aaPredicted RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ANPEPP15144 967 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF17P17021 662 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 PSMC3P17980 439 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 RPL35AP18077 110 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 NCF2P19878 526 aaPredicted RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 CD22P20273 847 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 IMPDH1P20839 514 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 CD9P21926 228 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 GPX3P22352 226 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 JAK1P23458 1154 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 MPZP25189 248 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 IMPA1P29218 277 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 IL12AP29459 219 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 PRDX6P30041 224 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 HOXA9P31269 272 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 CCR7P32248 378 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 HMGCLP35914 325 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 SLC26A3P40879 764 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 OPRD1P41143 372 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 RAD52P43351 418 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 PSMD8P48556 350 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 CSNK1DP48730 415 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 SPINT3P49223 89 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 MRPL19P49406 292 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 TTPAP49638 278 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 PRLHRP49683 370 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 NUDT2P50583 147 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 RPL14P50914 215 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ATP4BP51164 291 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 CCNG1P51959 295 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 KPNA2P52292 529 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 SLC7A2P52569 658 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ATXN3P54252 364 aaPredicted RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 DIO3P55073 304 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 AQP4P55087 323 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ADARP55265 1226 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 PKNOX1P55347 436 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 NME5P56597 212 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 DCDC1P59894 354 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ERVPABLB-1P60509 514 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ACTR3P61158 418 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 RPL26P61254 145 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ATP6V0D1P61421 351 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 RPL38P63173 70 aaKnown RBP1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms