RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 FAM107BQ9H098 131 aa10.18□□□□□ -0.78
CPNE1-222ENST00000473373 NSRP1Q9H0G5 558 aaKnown RBP10.18□□□□□ -0.78
CPNE1-222ENST00000473373 SLCO5A1Q9H2Y9 848 aa10.18□□□□□ -0.78
CPNE1-222ENST00000473373 ALG2Q9H553 416 aa10.18□□□□□ -0.78
CPNE1-222ENST00000473373 CXorf56Q9H5V9 222 aa10.18□□□□□ -0.78
CPNE1-222ENST00000473373 ZNF385DQ9H6B1 395 aa10.18□□□□□ -0.78
CPNE1-222ENST00000473373 KLHL14Q9P2G3 628 aa10.18□□□□□ -0.78
CPNE1-222ENST00000473373 ING1Q9UK53 422 aaPredicted RBP10.18□□□□□ -0.78
CPNE1-222ENST00000473373 RASD1Q9Y272 281 aa10.18□□□□□ -0.78
CPNE1-222ENST00000473373 CHST2Q9Y4C5 530 aa10.18□□□□□ -0.78
CPNE1-222ENST00000473373 ROS1P08922 2347 aa10.18□□□□□ -0.78
CPNE1-222ENST00000473373 ZNF587BE7ETH6 402 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 M0R1B8 84 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 HS3ST1O14792 307 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 KLF4O43474 513 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 CCDC22O60826 627 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 SERPINI2O75830 405 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 MFN2O95140 757 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 OR6A2O95222 327 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 PLAUP00749 431 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 CD247P20963 164 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 EDNRAP25101 427 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 PCGF2P35227 344 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 ZNF83P51522 516 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 CLDN17P56750 224 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 BSPH1Q075Z2 132 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 DMTNQ08495 405 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 FOXD4Q12950 439 aaPredicted RBP10.17□□□□□ -0.78
CPNE1-222ENST00000473373 SLC17A1Q14916 467 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 FAM69AQ5T7M9 428 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 FAM91A1Q658Y4 838 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 NANOGP8Q6NSW7 305 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 HMBOX1Q6NT76 420 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 SLC22A25Q6T423 547 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 P2RY8Q86VZ1 359 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 POMGNT2Q8NAT1 580 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 KTI12Q96EK9 354 aaPredicted RBP10.17□□□□□ -0.78
CPNE1-222ENST00000473373 KCNS3Q9BQ31 491 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 KAT8Q9H7Z6 458 aaKnown RBP10.17□□□□□ -0.78
CPNE1-222ENST00000473373 NANOGQ9H9S0 305 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 C12orf10Q9HB07 376 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 SAR1AQ9NR31 198 aa10.17□□□□□ -0.78
CPNE1-222ENST00000473373 MAP1AP78559 2803 aaPredicted RBP10.17□□□□□ -0.78
CPNE1-222ENST00000473373 HRNRQ86YZ3 2850 aaPredicted RBP10.16□□□□□ -0.78
CPNE1-222ENST00000473373 TRAV36DV7A0A075B6V5 113 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 OR5H1A6NKK0 313 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 TMEM229AB2RXF0 380 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 M0R082 166 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 FBP2O00757 339 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 ABCD4O14678 606 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 GSTA4O15217 222 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 WNT11O96014 354 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 NPPAP01160 153 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 IFNA14P01570 189 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 UMPSP11172 480 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 COX5AP20674 150 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 AHCYP23526 432 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 HTR2AP28223 471 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 CDH11P55287 796 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 UBE2NP61088 152 aaKnown RBP10.16□□□□□ -0.78
CPNE1-222ENST00000473373 H3F3AP84243 136 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 MFSD13AQ14CX5 517 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 ADRM1Q16186 407 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 VMACQ2NL98 169 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 LRRC23Q53EV4 343 aaPredicted RBP10.16□□□□□ -0.78
CPNE1-222ENST00000473373 RABL3Q5HYI8 236 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 Q5PR19 223 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 NCMAPQ5T1S8 102 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 TSPO2Q5TGU0 170 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 SHEQ5VZ18 495 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 ERICH5Q6P6B1 374 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 TTC33Q6PID6 262 aaPredicted RBP10.16□□□□□ -0.78
CPNE1-222ENST00000473373 TMEM108Q6UXF1 575 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 PTOV1Q86YD1 416 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 KDM8Q8N371 416 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 GPR137CQ8N3F9 429 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 POU5F2Q8N7G0 328 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 LSMEM1Q8N8F7 131 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 KBTBD8Q8NFY9 601 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 OR8J3Q8NGG0 315 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 ZNF417Q8TAU3 575 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 TMEM45BQ96B21 275 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 RADILQ96JH8 1075 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 ZNF385AQ96PM9 386 aaKnown RBP10.16□□□□□ -0.78
CPNE1-222ENST00000473373 ALKBH3Q96Q83 286 aaPredicted RBP10.16□□□□□ -0.78
CPNE1-222ENST00000473373 ZNF587Q96SQ5 575 aaPredicted RBP10.16□□□□□ -0.78
CPNE1-222ENST00000473373 C1QTNF6Q9BXI9 259 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 SLC7A10Q9NS82 523 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 FAIMQ9NVQ4 179 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 ARMCX1Q9P291 453 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 MALT1Q9UDY8 824 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 LAMP3Q9UQV4 416 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 AMDHD2Q9Y303 409 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 MAGED1Q9Y5V3 778 aaPredicted RBP10.16□□□□□ -0.78
CPNE1-222ENST00000473373 GMEB1Q9Y692 573 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 DNHD1Q96M86 4753 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 CADP27708 2225 aa10.16□□□□□ -0.78
CPNE1-222ENST00000473373 OR6C65A6NJZ3 312 aa10.15□□□□□ -0.78
CPNE1-222ENST00000473373 KPNA4O00629 521 aaPredicted RBP10.15□□□□□ -0.78
CPNE1-222ENST00000473373 ATP8B1O43520 1251 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms