RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 ZNF317Q96PQ6 595 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-207ENST00000468385 SNX18Q96RF0 628 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 PLA2G12AQ9BZM1 189 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 ZNF442Q9H7R0 627 aa11.33□□□□□ -0.6
PTPN7-207ENST00000468385 FBXO9Q9UK97 447 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-207ENST00000468385 FRS3O43559 492 aa11.32□□□□□ -0.6
PTPN7-207ENST00000468385 ITM2AO43736 263 aa11.32□□□□□ -0.6
PTPN7-207ENST00000468385 SNUPNO95149 360 aaKnown RBP11.32□□□□□ -0.6
PTPN7-207ENST00000468385 CELA3BP08861 270 aa11.32□□□□□ -0.6
PTPN7-207ENST00000468385 NUDT17P0C025 328 aa11.32□□□□□ -0.6
PTPN7-207ENST00000468385 GKN3PP0CG01 181 aa11.32□□□□□ -0.6
PTPN7-207ENST00000468385 UQCRBP14927 111 aa11.32□□□□□ -0.6
PTPN7-207ENST00000468385 CREB1P16220 341 aa11.32□□□□□ -0.6
PTPN7-207ENST00000468385 IL7RP16871 459 aa11.32□□□□□ -0.6
PTPN7-207ENST00000468385 CXCR1P25024 350 aa11.32□□□□□ -0.6
PTPN7-207ENST00000468385 ACAA2P42765 397 aaKnown RBP11.32□□□□□ -0.6
PTPN7-207ENST00000468385 BNIP2Q12982 314 aa11.32□□□□□ -0.6
PTPN7-207ENST00000468385 RIN1Q13671 783 aa11.32□□□□□ -0.6
PTPN7-207ENST00000468385 TMEM225Q6GV28 225 aa11.32□□□□□ -0.6
PTPN7-207ENST00000468385 NIPAL3Q6P499 406 aa11.32□□□□□ -0.6
PTPN7-207ENST00000468385 SPATA21Q7Z572 469 aa11.32□□□□□ -0.6
PTPN7-207ENST00000468385 SVOPLQ8N434 492 aa11.32□□□□□ -0.6
PTPN7-207ENST00000468385 TAPBPLQ9BX59 468 aa11.32□□□□□ -0.6
PTPN7-207ENST00000468385 LINC00470Q9BZP3 86 aa11.32□□□□□ -0.6
PTPN7-207ENST00000468385 MTHFD2LQ9H903 347 aaPredicted RBP11.32□□□□□ -0.6
PTPN7-207ENST00000468385 RLIMQ9NVW2 624 aa11.32□□□□□ -0.6
PTPN7-207ENST00000468385 ADPRHL2Q9NX46 363 aa11.32□□□□□ -0.6
PTPN7-207ENST00000468385 OR6C65A6NJZ3 312 aa11.31□□□□□ -0.6
PTPN7-207ENST00000468385 A8MVM7 634 aa11.31□□□□□ -0.6
PTPN7-207ENST00000468385 VAMP5O95183 116 aa11.31□□□□□ -0.6
PTPN7-207ENST00000468385 VENTXO95231 258 aa11.31□□□□□ -0.6
PTPN7-207ENST00000468385 DBIP07108 87 aaKnown RBP11.31□□□□□ -0.6
PTPN7-207ENST00000468385 HOXB1P14653 301 aaPredicted RBP11.31□□□□□ -0.6
PTPN7-207ENST00000468385 CBR1P16152 277 aa11.31□□□□□ -0.6
PTPN7-207ENST00000468385 NPR2P20594 1047 aa11.31□□□□□ -0.6
PTPN7-207ENST00000468385 ETV4P43268 484 aa11.31□□□□□ -0.6
PTPN7-207ENST00000468385 DVL1P1P54792 670 aaPredicted RBP11.31□□□□□ -0.6
PTPN7-207ENST00000468385 GNA13Q14344 377 aa11.31□□□□□ -0.6
PTPN7-207ENST00000468385 MAPK11Q15759 364 aa11.31□□□□□ -0.6
PTPN7-207ENST00000468385 RINLQ6ZS11 566 aa11.31□□□□□ -0.6
PTPN7-207ENST00000468385 CDK20Q8IZL9 346 aa11.31□□□□□ -0.6
PTPN7-207ENST00000468385 RIBC1Q8N443 379 aaPredicted RBP11.31□□□□□ -0.6
PTPN7-207ENST00000468385 ZNF781Q8N8C0 355 aa11.31□□□□□ -0.6
PTPN7-207ENST00000468385 UBASH3BQ8TF42 649 aa11.31□□□□□ -0.6
PTPN7-207ENST00000468385 ZDHHC16Q969W1 377 aa11.31□□□□□ -0.6
PTPN7-207ENST00000468385 CCDC115Q96NT0 180 aa11.31□□□□□ -0.6
PTPN7-207ENST00000468385 MOV10Q9HCE1 1003 aaKnown RBP11.31□□□□□ -0.6
PTPN7-207ENST00000468385 LGALS13Q9UHV8 139 aa11.31□□□□□ -0.6
PTPN7-207ENST00000468385 BTNL2Q9UIR0 455 aa11.31□□□□□ -0.6
PTPN7-207ENST00000468385 PCDHB14Q9Y5E9 798 aa11.31□□□□□ -0.6
PTPN7-207ENST00000468385 IGHV2OR16-5A0A0B4J2B6 119 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 CDHR4A6H8M9 788 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 ZNF503-AS2A6NEH8 195 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 TMEM229AB2RXF0 380 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 LYNX1G3V0Z9 82 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 RPL36A-HNRNPH2H7BZ11 118 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 NPIPB7O75200 414 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 ERCC1P07992 297 aaPredicted RBP11.3□□□□□ -0.6
PTPN7-207ENST00000468385 LYNX1P0DP58 116 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 IFNGR1P15260 489 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 CDKN2CP42773 168 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 SH3BGRP55822 239 aaPredicted RBP11.3□□□□□ -0.6
PTPN7-207ENST00000468385 ROR2Q01974 943 aaKnown RBP11.3□□□□□ -0.6
PTPN7-207ENST00000468385 CCNIQ14094 377 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 ADRM1Q16186 407 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 DPY19L1Q2PZI1 675 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 FAM174BQ3ZCQ3 159 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 COX20Q5RI15 118 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 C1orf140Q5VVS0 124 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 PRAMEF8Q5VWM4 474 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 PRAMEF7Q5VXH5 474 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 WBP2NLQ6ICG8 309 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 DEF8Q6ZN54 512 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 ZNF836Q6ZNA1 936 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 VRK2Q86Y07 508 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 ZNF440Q8IYI8 595 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 SEMA6DQ8NFY4 1073 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 KIF18AQ8NI77 898 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 TEX37Q96LM6 180 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 ANKRD27Q96NW4 1050 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 METRNQ9UJH8 293 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 RASD1Q9Y272 281 aa11.3□□□□□ -0.6
PTPN7-207ENST00000468385 SH3PXD2BA1X283 911 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 CCDC154A6NI56 674 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 VSTM5A8MXK1 200 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 FTCDNL1E5RQL4 147 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 E9PBE3 544 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 SPRY1O43609 319 aaPredicted RBP11.29□□□□□ -0.6
PTPN7-207ENST00000468385 TYROBPO43914 113 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 ZNF432O94892 652 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 ADRA2AP08913 450 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 TFPTP0C1Z6 253 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 NR2F1P10589 423 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 S100A3P33764 101 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 CLNS1AP54105 237 aaKnown RBP11.29□□□□□ -0.6
PTPN7-207ENST00000468385 TXNL4AP83876 142 aaKnown RBP11.29□□□□□ -0.6
PTPN7-207ENST00000468385 ARF1P84077 181 aaKnown RBP11.29□□□□□ -0.6
PTPN7-207ENST00000468385 UGT2A3Q6UWM9 527 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 NUDCD3Q8IVD9 361 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 PEX5LQ8IYB4 626 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms