RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 FERD3LQ96RJ6 166 aa18.13■□□□□ 0.49
SDF4-205ENST00000465727 RASL12Q9NYN1 266 aa18.13■□□□□ 0.49
SDF4-205ENST00000465727 MTFP1Q9UDX5 166 aa18.13■□□□□ 0.49
SDF4-205ENST00000465727 ACOD1A6NK06 481 aa18.12■□□□□ 0.49
SDF4-205ENST00000465727 ZNF98A6NK75 572 aa18.12■□□□□ 0.49
SDF4-205ENST00000465727 TEX46H3BTG2 121 aa18.12■□□□□ 0.49
SDF4-205ENST00000465727 GLSO94925 669 aaPredicted RBP18.12■□□□□ 0.49
SDF4-205ENST00000465727 SIX6O95475 246 aa18.12■□□□□ 0.49
SDF4-205ENST00000465727 DEFA5Q01523 94 aa18.12■□□□□ 0.49
SDF4-205ENST00000465727 MC2RQ01718 297 aa18.12■□□□□ 0.49
SDF4-205ENST00000465727 PON3Q15166 354 aa18.12■□□□□ 0.49
SDF4-205ENST00000465727 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.12■□□□□ 0.493e-10■■□□□ 11.5
SDF4-205ENST00000465727 SLC35F3Q8IY50 421 aa18.12■□□□□ 0.49
SDF4-205ENST00000465727 CCDC36Q8IYA8 594 aa18.12■□□□□ 0.49
SDF4-205ENST00000465727 ARL14Q8N4G2 192 aa18.12■□□□□ 0.49
SDF4-205ENST00000465727 OR52E2Q8NGJ4 325 aa18.12■□□□□ 0.49
SDF4-205ENST00000465727 WFIKKN2Q8TEU8 576 aa18.12■□□□□ 0.49
SDF4-205ENST00000465727 TNFAIP8L1Q8WVP5 186 aa18.12■□□□□ 0.49
SDF4-205ENST00000465727 PMM1Q92871 262 aa18.12■□□□□ 0.49
SDF4-205ENST00000465727 OTUB2Q96DC9 234 aa18.12■□□□□ 0.49
SDF4-205ENST00000465727 ZNF559Q9BR84 538 aa18.12■□□□□ 0.49
SDF4-205ENST00000465727 C6orf106Q9H6K1 298 aaPredicted RBP18.12■□□□□ 0.49
SDF4-205ENST00000465727 IFT22Q9H7X7 185 aa18.12■□□□□ 0.49
SDF4-205ENST00000465727 TMEM27Q9HBJ8 222 aa18.12■□□□□ 0.49
SDF4-205ENST00000465727 A0A0D9SG52 128 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 GXYLT2A0PJZ3 443 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 CXCL10P02778 98 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 C8AP07357 584 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 RBM34P42696 430 aaKnown RBP18.11■□□□□ 0.49
SDF4-205ENST00000465727 S100A12P80511 92 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 SREBF2Q12772 1141 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 SLC35D3Q5M8T2 416 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 MUC20Q8N307 709 aaPredicted RBP18.11■□□□□ 0.49
SDF4-205ENST00000465727 ST8SIA2Q92186 375 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 C10orf90Q96M02 699 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 TNFRSF13CQ96RJ3 184 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 SAV1Q9H4B6 383 aaPredicted RBP18.11■□□□□ 0.49
SDF4-205ENST00000465727 CHRNA9Q9UGM1 479 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 NUMA1Q14980 2115 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 H7C2Y5 167 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 CBX7O95931 251 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 NAA10P41227 235 aaPredicted RBP18.11■□□□□ 0.49
SDF4-205ENST00000465727 CCR2P41597 374 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 TM4SF4P48230 202 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 CLDN12P56749 244 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 NTHL1P78549 312 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 OC90Q02509 493 aaPredicted RBP18.11■□□□□ 0.49
SDF4-205ENST00000465727 C2orf68Q2NKX9 166 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 PCGF3Q3KNV8 242 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 PAQR7Q86WK9 346 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 OR4C16Q8NGL9 310 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 ALX4Q9H161 411 aaPredicted RBP18.11■□□□□ 0.49
SDF4-205ENST00000465727 TCF7L1Q9HCS4 588 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 TM7SF3Q9NS93 570 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 TAS2R3Q9NYW6 316 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 BRCA2P51587 3418 aa18.11■□□□□ 0.49
SDF4-205ENST00000465727 FAM74A7A6NL05 159 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 XRCC3O43542 346 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 LILRB3O75022 631 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 RLN1P04808 185 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 MST1P26927 711 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 DIO1P49895 249 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 IRF4Q15306 451 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 FAM74A3Q4VXF1 159 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 CCDC157Q569K6 752 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 DCST2Q5T1A1 773 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 C11orf88Q6PI97 169 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 UQCC3Q6UW78 93 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 MOB3CQ70IA8 216 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 DND1Q8IYX4 353 aaKnown RBP18.1■□□□□ 0.49
SDF4-205ENST00000465727 SDR9C7Q8NEX9 313 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 OR8D1Q8WZ84 308 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 ZNF426Q9BUY5 554 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 BARX1Q9HBU1 254 aaPredicted RBP18.1■□□□□ 0.49
SDF4-205ENST00000465727 C2orf42Q9NWW7 574 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 MRTO4Q9UKD2 239 aaKnown RBP18.1■□□□□ 0.49
SDF4-205ENST00000465727 DENND4AQ7Z401 1863 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 IGF2P01344 180 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 PSMB10P40306 273 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 CDK3Q00526 305 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 DCAF12L2Q5VW00 463 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 STAC2Q6ZMT1 411 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 MTSS1LQ765P7 747 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 MFSD9Q8NBP5 474 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 PHYHIPLQ96FC7 376 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 SCLYQ96I15 445 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 TMEM138Q9NPI0 162 aa18.1■□□□□ 0.49
SDF4-205ENST00000465727 APOBEC3BQ9UH17 382 aaKnown RBP18.1■□□□□ 0.49
SDF4-205ENST00000465727 PRRC2BQ5JSZ5 2229 aaKnown RBP18.09■□□□□ 0.49
SDF4-205ENST00000465727 A0A0B4J2E0 115 aa18.09■□□□□ 0.49
SDF4-205ENST00000465727 A0A1B0GX12 115 aa18.09■□□□□ 0.49
SDF4-205ENST00000465727 EIF4E2O60573 245 aaKnown RBP18.09■□□□□ 0.49
SDF4-205ENST00000465727 PTHLHP12272 177 aa18.09■□□□□ 0.49
SDF4-205ENST00000465727 HIST1H1CP16403 213 aaKnown RBP18.09■□□□□ 0.49
SDF4-205ENST00000465727 EPCAMP16422 314 aa18.09■□□□□ 0.49
SDF4-205ENST00000465727 LAG3P18627 525 aa18.09■□□□□ 0.49
SDF4-205ENST00000465727 RPS15P62841 145 aaKnown RBP18.09■□□□□ 0.49
SDF4-205ENST00000465727 SORDQ00796 357 aa18.09■□□□□ 0.49
SDF4-205ENST00000465727 FHL1Q13642 323 aa18.09■□□□□ 0.49
SDF4-205ENST00000465727 GRM7Q14831 915 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms