RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 GRIP2Q9C0E4 1043 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 PRDM14Q9GZV8 571 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 TOR3AQ9H497 397 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 EGLN3Q9H6Z9 239 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 ALKBH4Q9NXW9 302 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 SMPD3Q9NY59 655 aaPredicted RBP12.86□□□□□ -0.35
COL6A1-202ENST00000463060 KIF17Q9P2E2 1029 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 SEC14L4Q9UDX3 406 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 CORINQ9Y5Q5 1042 aa12.86□□□□□ -0.35
COL6A1-202ENST00000463060 TRAV27A0A087WT01 109 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 A0A1B0GTH9 108 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 OR14I1A6ND48 311 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 ZNF814B7Z6K7 855 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 M0R082 166 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 PLPP3O14495 311 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 EIF1AYO14602 144 aaKnown RBP12.85□□□□□ -0.35
COL6A1-202ENST00000463060 TNFSF11O14788 317 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 SLC16A6O15403 523 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 SAGP10523 405 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-202ENST00000463060 KLK2P20151 261 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 CRISP1P54107 249 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 RAD23AP54725 363 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 AQP4P55087 323 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 CARD18P57730 90 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 OR2B6P58173 313 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 SLC35A1P78382 337 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 ADARB1P78563 741 aaKnown RBP12.85□□□□□ -0.35
COL6A1-202ENST00000463060 CDK5Q00535 292 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 ZIK1Q3SY52 487 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-202ENST00000463060 HBMQ6B0K9 141 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 ARHGAP11AQ6P4F7 1023 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 IZUMO2Q6UXV1 221 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 THSD4Q6ZMP0 1018 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 H1FNTQ75WM6 255 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-202ENST00000463060 ADGRE4PQ86SQ3 457 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 C10orf53Q8N6V4 93 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 OR51A7Q8NH64 312 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 OR10D3Q8NH80 312 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 ZNF417Q8TAU3 575 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 SMPDL3BQ92485 455 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 ZNF587Q96SQ5 575 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-202ENST00000463060 TAPBPLQ9BX59 468 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 SRXN1Q9BYN0 137 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 PLA2G12AQ9BZM1 189 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 FAM118AQ9NWS6 357 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 TNFRSF10DQ9UBN6 386 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 CDH10Q9Y6N8 788 aa12.85□□□□□ -0.35
COL6A1-202ENST00000463060 SPENQ96T58 3664 aaKnown RBP12.84□□□□□ -0.35
COL6A1-202ENST00000463060 LOC102725191A0A1B0GVB3 256 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 AQP7P3A6NL99 342 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 ZAR1LA6NP61 321 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 CXCL13O43927 109 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 EIF1BO60739 113 aaKnown RBP12.84□□□□□ -0.35
COL6A1-202ENST00000463060 AKR7A3O95154 331 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 RCBTB2O95199 551 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 AQP2P41181 271 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 GIPRP48546 466 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 CSNK2A1P68400 391 aaPredicted RBP12.84□□□□□ -0.35
COL6A1-202ENST00000463060 HSF1Q00613 529 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 SLC36A3Q495N2 470 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 PRR30Q53SZ7 412 aaPredicted RBP12.84□□□□□ -0.35
COL6A1-202ENST00000463060 EMC4Q5J8M3 183 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 SMARCD3Q6STE5 483 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 PAQR6Q6TCH4 344 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 UBQLNLQ8IYU4 475 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 GHDCQ8N2G8 530 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 MEIOBQ8N635 442 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 TMEM99Q8N816 258 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 LSM14AQ8ND56 463 aaKnown RBP12.84□□□□□ -0.35
COL6A1-202ENST00000463060 MOSPD2Q8NHP6 518 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 TFAP2CQ92754 450 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 SARAFQ96BY9 339 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 SAMD8Q96LT4 415 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 GPX7Q96SL4 187 aaPredicted RBP12.84□□□□□ -0.35
COL6A1-202ENST00000463060 ASPNQ9BXN1 380 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 VCXQ9H320 206 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 OR52D1Q9H346 318 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 EXO5Q9H790 373 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 CHST11Q9NPF2 352 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 ASF1BQ9NVP2 202 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 ENOPH1Q9UHY7 261 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 B3GALT5Q9Y2C3 310 aa12.84□□□□□ -0.35
COL6A1-202ENST00000463060 BHLHE40O14503 412 aa12.83□□□□□ -0.36
COL6A1-202ENST00000463060 SMAD9O15198 467 aaKnown RBP12.83□□□□□ -0.36
COL6A1-202ENST00000463060 ZNHIT1O43257 154 aa12.83□□□□□ -0.36
COL6A1-202ENST00000463060 SEC14L5O43304 696 aa12.83□□□□□ -0.36
COL6A1-202ENST00000463060 RAMP1O60894 148 aa12.83□□□□□ -0.36
COL6A1-202ENST00000463060 SOX14O95416 240 aa12.83□□□□□ -0.36
COL6A1-202ENST00000463060 HIST1H2ABP04908 130 aa12.83□□□□□ -0.36
COL6A1-202ENST00000463060 PRPS1P60891 318 aa12.83□□□□□ -0.36
COL6A1-202ENST00000463060 EFNB1P98172 346 aa12.83□□□□□ -0.36
COL6A1-202ENST00000463060 RPL18Q07020 188 aaKnown RBP12.83□□□□□ -0.36
COL6A1-202ENST00000463060 PMS2P3Q13401 168 aa12.83□□□□□ -0.36
COL6A1-202ENST00000463060 PTGES3Q15185 160 aaKnown RBP12.83□□□□□ -0.36
COL6A1-202ENST00000463060 GXYLT1Q4G148 440 aa12.83□□□□□ -0.36
COL6A1-202ENST00000463060 PDSS1Q5T2R2 415 aa12.83□□□□□ -0.36
COL6A1-202ENST00000463060 RPL13AP3Q6NVV1 102 aa12.83□□□□□ -0.36
COL6A1-202ENST00000463060 HIST3H2AQ7L7L0 130 aa12.83□□□□□ -0.36
COL6A1-202ENST00000463060 SLC43A2Q8N370 569 aa12.83□□□□□ -0.36
COL6A1-202ENST00000463060 HIST1H2ACQ93077 130 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms