RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 AQP1P29972 269 aa12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 SLC7A1P30825 629 aa12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 HOXC5Q00444 222 aa12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 ANK2Q01484 3957 aa12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 RNPS1Q15287 305 aaKnown RBP12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 NPTX1Q15818 432 aa12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 FXNQ16595 210 aa12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 MMEL1Q495T6 779 aa12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 C6orf52Q5T4I8 152 aa12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 LINC00114Q6XXX2 140 aa12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 PATL1Q86TB9 770 aaKnown RBP12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 ARMC8Q8IUR7 673 aa12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 OR4D11Q8NGI4 311 aa12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 GTPBP3Q969Y2 492 aaKnown RBP12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 OR5B2Q96R09 309 aa12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 PTDSS2Q9BVG9 487 aa12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 NSRP1Q9H0G5 558 aaKnown RBP12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 GID8Q9NWU2 228 aa12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 LPAR3Q9UBY5 353 aa12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 LAMP3Q9UQV4 416 aa12.07□□□□□ -0.48
SCAMP4-206ENST00000460767 IGKV1D-42A0A075B6H8 117 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 A0A096LNT2 108 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 ZNF724A8MTY0 619 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 NME4O00746 187 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 RAMP1O60894 148 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 PRKD3O94806 890 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 SYNGR4O95473 234 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 PLAUP00749 431 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 THY1P04216 161 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 FESP07332 822 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 NTF4P34130 210 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 CSNK2A1P68400 391 aaPredicted RBP12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 SIRPAP78324 504 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 INTS11Q5TA45 600 aaKnown RBP12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 ERICH5Q6P6B1 374 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 STAC2Q6ZMT1 411 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 ARPINQ7Z6K5 226 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 SMYD1Q8NB12 490 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 ATP6V1C2Q8NEY4 427 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 STK35Q8TDR2 534 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 AKAP1Q92667 903 aaKnown RBP eCLIP12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 SLC38A4Q969I6 547 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 PLPPR2Q96GM1 343 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 HOPXQ9BPY8 73 aaPredicted RBP12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 ZNF426Q9BUY5 554 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 BARX1Q9HBU1 254 aaPredicted RBP12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 FANCFQ9NPI8 374 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 TMEM181Q9P2C4 612 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 TESQ9UGI8 421 aaKnown RBP12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 CLEC4AQ9UMR7 237 aa12.06□□□□□ -0.48
SCAMP4-206ENST00000460767 A0A1B0GWA3 101 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 LIPT2A6NK58 231 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 CCT8L1PA6NM43 557 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 A8MVM7 634 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 HAX1O00165 279 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 SULT2B1O00204 365 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 YES1P07947 543 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 EDNRAP25101 427 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 ACVR1BP36896 505 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 SWT1Q5T5J6 900 aaKnown RBP12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 GTF2IRD2BQ6EKJ0 949 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 PAQR6Q6TCH4 344 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 TFAP2EQ6VUC0 442 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 NUFIP2Q7Z417 695 aaKnown RBP12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 CPLX4Q7Z7G2 160 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 GTF2IRD2Q86UP8 949 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 TUSC5Q8IXB3 177 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 GABRG1Q8N1C3 465 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 OR6T1Q8NGN1 323 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 LILRB1Q8NHL6 650 aaPredicted RBP12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 FBXW5Q969U6 566 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 CMTM5Q96DZ9 223 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 CCT8L2Q96SF2 557 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 TACO1Q9BSH4 297 aaKnown RBP12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 C19orf24Q9BVV8 132 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 PRR14Q9BWN1 585 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 TRIM2Q9C040 744 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 KLHL4Q9C0H6 718 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 FAM107BQ9H098 131 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 EFCAB1Q9HAE3 211 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 KLHL9Q9P2J3 617 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 GMPR2Q9P2T1 348 aaKnown RBP12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 AP3M1Q9Y2T2 418 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 ARL2BPQ9Y2Y0 163 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 ROS1P08922 2347 aa12.05□□□□□ -0.48
SCAMP4-206ENST00000460767 ALPK2Q86TB3 2170 aa12.04□□□□□ -0.48
SCAMP4-206ENST00000460767 A0A087WUJ7 227 aa12.04□□□□□ -0.48
SCAMP4-206ENST00000460767 IGHV3-15A0A0B4J1V0 119 aa12.04□□□□□ -0.48
SCAMP4-206ENST00000460767 AIM2O14862 343 aa12.04□□□□□ -0.48
SCAMP4-206ENST00000460767 FAM107AO95990 144 aa12.04□□□□□ -0.48
SCAMP4-206ENST00000460767 OPN1SWP03999 348 aa12.04□□□□□ -0.48
SCAMP4-206ENST00000460767 SOD3P08294 240 aa12.04□□□□□ -0.48
SCAMP4-206ENST00000460767 PSMB1P20618 241 aaKnown RBP12.04□□□□□ -0.48
SCAMP4-206ENST00000460767 COPZ1P61923 177 aa12.04□□□□□ -0.48
SCAMP4-206ENST00000460767 CADM2Q8N3J6 435 aa12.04□□□□□ -0.48
SCAMP4-206ENST00000460767 DNAJA4Q8WW22 397 aaPredicted RBP12.04□□□□□ -0.48
SCAMP4-206ENST00000460767 DDIT4LQ96D03 193 aa12.04□□□□□ -0.48
SCAMP4-206ENST00000460767 ECSITQ9BQ95 431 aa12.04□□□□□ -0.48
SCAMP4-206ENST00000460767 GPR52Q9Y2T5 361 aa12.04□□□□□ -0.48
SCAMP4-206ENST00000460767 EMC9Q9Y3B6 208 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms