RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 OLFML2AQ68BL7 652 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 TMPRSS12Q86WS5 348 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 FAM219AQ8IW50 185 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 GLB1L2Q8IW92 636 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 OR6K3Q8NGY3 331 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 SETD7Q8WTS6 366 aaKnown RBP10.75□□□□□ -0.69
CPSF3-202ENST00000460593 PTCHD1Q96NR3 888 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 OR52A5Q9H2C5 316 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 EXO5Q9H790 373 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 TRPV4Q9HBA0 871 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 FBXL3Q9UKT7 428 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 A0A1W2PPV9 198 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 NAP1L6A6NFF2 107 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 SNRPGP15A8MWD9 76 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 TBX19O60806 448 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 ZFPL1O95159 310 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 CRYBA1P05813 215 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 RD3LP0DJH9 198 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 GTF2F2P13984 249 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 HIST1H1CP16403 213 aaKnown RBP10.75□□□□□ -0.69
CPSF3-202ENST00000460593 BCL6P41182 706 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 RPS27P42677 84 aaKnown RBP10.75□□□□□ -0.69
CPSF3-202ENST00000460593 EPHB3P54753 998 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 IL10RAQ13651 578 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 TAF13Q15543 124 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 DUSP5Q16690 384 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 NDUFAF6Q330K2 333 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 FNDC3BQ53EP0 1204 aaKnown RBP10.75□□□□□ -0.69
CPSF3-202ENST00000460593 FIGNL1Q6PIW4 674 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 FAM83CQ9BQN1 747 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 SLC35A3Q9Y2D2 325 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 V9GY05 133 aa10.75□□□□□ -0.69
CPSF3-202ENST00000460593 RANBP2P49792 3224 aaKnown RBP10.75□□□□□ -0.69
CPSF3-202ENST00000460593 OGG1O15527 345 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 EMC8O43402 210 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 RAD1O60671 282 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 DNAJB6O75190 326 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 NDUFS6O75380 124 aaKnown RBP10.74□□□□□ -0.69
CPSF3-202ENST00000460593 CD3DP04234 171 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 IL5P05113 134 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 ACAA1P09110 424 aaPredicted RBP10.74□□□□□ -0.69
CPSF3-202ENST00000460593 REEP5Q00765 189 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 OR7A5Q15622 319 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 MRPL2Q5T653 305 aaKnown RBP10.74□□□□□ -0.69
CPSF3-202ENST00000460593 TMEM71Q6P5X7 295 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 BAIAP2L2Q6UXY1 529 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 HTR3DQ70Z44 454 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 OVCH1Q7RTY7 1134 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 ASPGQ86U10 573 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 TEX19Q8NA77 164 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 OR10AC1Q8NH08 325 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 OR14A16Q8NHC5 309 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 SP7Q8TDD2 431 aaPredicted RBP10.74□□□□□ -0.69
CPSF3-202ENST00000460593 TRMT2BQ96GJ1 504 aaKnown RBP10.74□□□□□ -0.69
CPSF3-202ENST00000460593 SLC46A2Q9BY10 475 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 ULBP3Q9BZM4 244 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 TINAGL1Q9GZM7 467 aaPredicted RBP10.74□□□□□ -0.69
CPSF3-202ENST00000460593 POFUT1Q9H488 388 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 SAGE1Q9NXZ1 904 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 AKAP7Q9P0M2 348 aaPredicted RBP10.74□□□□□ -0.69
CPSF3-202ENST00000460593 MYEF2Q9P2K5 600 aaKnown RBP10.74□□□□□ -0.69
CPSF3-202ENST00000460593 DHCR7Q9UBM7 475 aaKnown RBP10.74□□□□□ -0.69
CPSF3-202ENST00000460593 NDRG3Q9UGV2 375 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 KCNE5Q9UJ90 142 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 ABT1Q9ULW3 272 aaKnown RBP10.74□□□□□ -0.69
CPSF3-202ENST00000460593 M0QYG6 137 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 SGCEO43556 437 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 EIF4E2O60573 245 aaKnown RBP10.74□□□□□ -0.69
CPSF3-202ENST00000460593 LATS1O95835 1130 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 GP1BAP07359 652 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 TYRP14679 529 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 ZNF3P17036 446 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 TYRP1P17643 537 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 CSNK2A2P19784 350 aaPredicted RBP10.74□□□□□ -0.69
CPSF3-202ENST00000460593 PRKAR1BP31321 381 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 CAPZA2P47755 286 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 GMFBP60983 142 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 SCRN3Q0VDG4 424 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 MESP2Q0VG99 397 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 SMAD2Q15796 467 aaKnown RBP10.74□□□□□ -0.69
CPSF3-202ENST00000460593 SWI5Q1ZZU3 235 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 RAB11FIP2Q7L804 512 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 LRRTM1Q86UE6 522 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 TMEM17Q86X19 198 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 IFNL1Q8IU54 200 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 NPAS4Q8IUM7 802 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 SLC35F2Q8IXU6 374 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 OR56A1Q8NGH5 318 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 TCEAL4Q96EI5 215 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 Q96M85 177 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 ZMAT3Q9HA38 289 aaKnown RBP10.74□□□□□ -0.69
CPSF3-202ENST00000460593 IL36AQ9UHA7 158 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 SPEGQ15772 3267 aa10.74□□□□□ -0.69
CPSF3-202ENST00000460593 CACNA1IQ9P0X4 2223 aa10.73□□□□□ -0.69
CPSF3-202ENST00000460593 FAM25EA8MYX2 175 aa10.73□□□□□ -0.69
CPSF3-202ENST00000460593 ACOT7O00154 380 aa10.73□□□□□ -0.69
CPSF3-202ENST00000460593 SNRPEP62304 92 aaKnown RBP10.73□□□□□ -0.69
CPSF3-202ENST00000460593 CAP1Q01518 475 aa10.73□□□□□ -0.69
CPSF3-202ENST00000460593 AMZ1Q400G9 498 aa10.73□□□□□ -0.69
CPSF3-202ENST00000460593 LY6G6FQ5SQ64 297 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms