RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	EMC9	Q9Y3B6	208 aa		9.1	□□□□□ -0.95
MRPL55-223	ENST00000459783	FLVCR1	Q9Y5Y0	555 aa		9.1	□□□□□ -0.95
MRPL55-223	ENST00000459783	ENPP4	Q9Y6X5	453 aa		9.1	□□□□□ -0.95
MRPL55-223	ENST00000459783	MS4A18	H0YCH9	400 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	hCG_2039718	K7EN88	272 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	KPNA4	O00629	521 aa	Predicted RBP	9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	ACOT8	O14734	319 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	EIF1B	O60739	113 aa	Known RBP	9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	IFNW1	P05000	195 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	OR3A2	P47893	321 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	FOXG1	P55316	489 aa	Predicted RBP	9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	TAS2R41	P59536	307 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	LGALS3BP	Q08380	585 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	ZNF74	Q16587	644 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	MS4A18	Q3C1V0	323 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	SPATS1	Q496A3	300 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	LCN8	Q6JVE9	175 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	FKBP9P1	Q75LS8	142 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	MEX3D	Q86XN8	651 aa	Known RBP	9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	EPHX4	Q8IUS5	362 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	MCEMP1	Q8IX19	187 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	OFCC1	Q8IZS5	231 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	GABRG1	Q8N1C3	465 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	OR9K2	Q8NGE7	335 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	OR6S1	Q8NH40	331 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	LZIC	Q8WZA0	190 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	CCDC124	Q96CT7	223 aa	Known RBP	9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	ZHX1-C8orf76	Q96EF9	292 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	MPP4	Q96JB8	637 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	NSMCE2	Q96MF7	247 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	FUZ	Q9BT04	418 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	THTPA	Q9BU02	230 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	TAPBPL	Q9BX59	468 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	CADM1	Q9BY67	442 aa	Known RBP	9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	POLR2J2	Q9GZM3	115 aa	Known RBP	9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	POLR2J3	Q9H1A7	115 aa	Known RBP	9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	ACTR3B	Q9P1U1	418 aa		9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	PRPF19	Q9UMS4	504 aa	Known RBP	9.09	□□□□□ -0.95
MRPL55-223	ENST00000459783	ENO4	A6NNW6	628 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	TRAF3IP2	O43734	574 aa	Predicted RBP	9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	CH25H	O95992	272 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	IGHV3-9	P01782	118 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	HLA-DOB	P13765	273 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	FUT1	P19526	365 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	CD79B	P40259	229 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	FHL1	Q13642	323 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	TRIM25	Q14258	630 aa	Known RBP	9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	TSC22D1	Q15714	1073 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	EXOC3L2	Q2M3D2	409 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	TMEM201	Q5SNT2	666 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	EEF1A1P5	Q5VTE0	462 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	GTF2IRD2B	Q6EKJ0	949 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	TBPL2	Q6SJ96	375 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	C5orf46	Q6UWT4	87 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	STAC2	Q6ZMT1	411 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	GALNT5	Q7Z7M9	940 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	GTF2IRD2	Q86UP8	949 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	ARHGAP24	Q8N264	748 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	PIK3C3	Q8NEB9	887 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	LINC01560	Q8TB33	94 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	PYURF	Q96I23	114 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	DHRS1	Q96LJ7	313 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	NAA11	Q9BSU3	229 aa	Predicted RBP	9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	SF3B5	Q9BWJ5	86 aa	Known RBP	9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	CRIM1	Q9NZV1	1036 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	SELENON	Q9NZV5	590 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	RPS6KA6	Q9UK32	745 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	SAMD4A	Q9UPU9	718 aa	Known RBP	9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783	MPDZ	O75970	2070 aa		9.08	□□□□□ -0.96
MRPL55-223	ENST00000459783		A0A087WUU8	490 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	TRBV4-1	A0A0J9YWV2	114 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	PDLIM1	O00151	329 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	PLPP3	O14495	311 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	SIAH2	O43255	324 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	OR2T1	O43869	369 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	ZNF432	O94892	652 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	MT-ND1	P03886	318 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	THBD	P07204	575 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	ASAH2B	P0C7U1	165 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	THRB	P10828	461 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	COX6B1	P14854	86 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	MAK	P20794	623 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	UGT2B10	P36537	528 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	RBM34	P42696	430 aa	Known RBP	9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	CBX1	P83916	185 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	SORD	Q00796	357 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	POU4F3	Q15319	338 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	SEC23B	Q15437	767 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	TSPO2	Q5TGU0	170 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	ANKRD34A	Q69YU3	496 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	TTC33	Q6PID6	262 aa	Predicted RBP	9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	SEZ6L2	Q6UXD5	910 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	CREB3L2	Q70SY1	520 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	H1FNT	Q75WM6	255 aa	Predicted RBP	9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	LINGO2	Q7L985	606 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	GPAT4	Q86UL3	456 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	ADPRHL1	Q8NDY3	354 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	SLC7A13	Q8TCU3	470 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	TMEM239	Q8WW34	195 aa		9.07	□□□□□ -0.96
MRPL55-223	ENST00000459783	MARVELD3	Q96A59	401 aa		9.07	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms