RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 PTNP21246 168 aa14.28□□□□□ -0.12
CPSF6-203ENST00000456847 CBLP22681 906 aa14.28□□□□□ -0.12
CPSF6-203ENST00000456847 P2RY4P51582 365 aa14.28□□□□□ -0.12
CPSF6-203ENST00000456847 FOXG1P55316 489 aaPredicted RBP14.28□□□□□ -0.12
CPSF6-203ENST00000456847 Q5PR19 223 aa14.28□□□□□ -0.12
CPSF6-203ENST00000456847 FAM69AQ5T7M9 428 aa14.28□□□□□ -0.12
CPSF6-203ENST00000456847 SHEQ5VZ18 495 aa14.28□□□□□ -0.12
CPSF6-203ENST00000456847 OR7E24Q6IFN5 339 aa14.28□□□□□ -0.12
CPSF6-203ENST00000456847 NIPAL3Q6P499 406 aa14.28□□□□□ -0.12
CPSF6-203ENST00000456847 SEZ6L2Q6UXD5 910 aa14.28□□□□□ -0.12
CPSF6-203ENST00000456847 ABHD12BQ7Z5M8 362 aaPredicted RBP14.28□□□□□ -0.12
CPSF6-203ENST00000456847 LRRC75A-AS1Q8N1F1 130 aa14.28□□□□□ -0.12
CPSF6-203ENST00000456847 ZNF611Q8N823 705 aa14.28□□□□□ -0.12
CPSF6-203ENST00000456847 POMGNT2Q8NAT1 580 aa14.28□□□□□ -0.12
CPSF6-203ENST00000456847 KBTBD8Q8NFY9 601 aa14.28□□□□□ -0.12
CPSF6-203ENST00000456847 VANGL1Q8TAA9 524 aaPredicted RBP14.28□□□□□ -0.12
CPSF6-203ENST00000456847 FBXW5Q969U6 566 aa14.28□□□□□ -0.12
CPSF6-203ENST00000456847 LRRC58Q96CX6 371 aa14.28□□□□□ -0.12
CPSF6-203ENST00000456847 MCHR1Q99705 422 aa14.28□□□□□ -0.12
CPSF6-203ENST00000456847 ECSITQ9BQ95 431 aa14.28□□□□□ -0.12
CPSF6-203ENST00000456847 TEP1Q99973 2627 aaKnown RBP14.28□□□□□ -0.12
CPSF6-203ENST00000456847 CELSR1Q9NYQ6 3014 aa14.27□□□□□ -0.12
CPSF6-203ENST00000456847 TRAV36DV7A0A075B6V5 113 aa14.27□□□□□ -0.12
CPSF6-203ENST00000456847 FTCDNL1E5RQL4 147 aa14.27□□□□□ -0.12
CPSF6-203ENST00000456847 AIM2O14862 343 aa14.27□□□□□ -0.12
CPSF6-203ENST00000456847 MDH1P40925 334 aaKnown RBP14.27□□□□□ -0.12
CPSF6-203ENST00000456847 TGFBR3Q03167 851 aa14.27□□□□□ -0.12
CPSF6-203ENST00000456847 VMACQ2NL98 169 aa14.27□□□□□ -0.12
CPSF6-203ENST00000456847 RABL3Q5HYI8 236 aa14.27□□□□□ -0.12
CPSF6-203ENST00000456847 COQ5Q5HYK3 327 aa14.27□□□□□ -0.12
CPSF6-203ENST00000456847 NANOGP8Q6NSW7 305 aa14.27□□□□□ -0.12
CPSF6-203ENST00000456847 CREB3L2Q70SY1 520 aa14.27□□□□□ -0.12
CPSF6-203ENST00000456847 ZIC4Q8N9L1 334 aa14.27□□□□□ -0.12
CPSF6-203ENST00000456847 PCYOX1LQ8NBM8 494 aa14.27□□□□□ -0.12
CPSF6-203ENST00000456847 EPYCQ99645 322 aa14.27□□□□□ -0.12
CPSF6-203ENST00000456847 ARHGDIGQ99819 225 aa14.27□□□□□ -0.12
CPSF6-203ENST00000456847 NANOGQ9H9S0 305 aa14.27□□□□□ -0.12
CPSF6-203ENST00000456847 NPAP1Q9NZP6 1156 aa14.27□□□□□ -0.12
CPSF6-203ENST00000456847 HIVEP1P15822 2718 aa14.27□□□□□ -0.12
CPSF6-203ENST00000456847 IGKV1D-42A0A075B6H8 117 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 A0A0B4J2E0 115 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 A0A1B0GX12 115 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 DPRXA6NFQ7 191 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 M0R082 166 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 LGI1O95970 557 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 ZNF43P17038 809 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 CDH2P19022 906 aaPredicted RBP14.27□□□□□ -0.13
CPSF6-203ENST00000456847 MPGP29372 298 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 ZNF83P51522 516 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 C1DQ13901 141 aaKnown RBP14.27□□□□□ -0.13
CPSF6-203ENST00000456847 GABRA6Q16445 453 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 DUSP7Q16829 419 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 KLHL17Q6TDP4 642 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 KLHL24Q6TFL4 600 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 KDM8Q8N371 416 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 C10orf53Q8N6V4 93 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 C1orf162Q8NEQ5 155 aaPredicted RBP14.27□□□□□ -0.13
CPSF6-203ENST00000456847 OR8J3Q8NGG0 315 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 ZNF417Q8TAU3 575 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 NEUROG1Q92886 237 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 TAAR8Q969N4 342 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 ZNF587Q96SQ5 575 aaPredicted RBP14.27□□□□□ -0.13
CPSF6-203ENST00000456847 WFDC6Q9BQY6 131 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 CXorf56Q9H5V9 222 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 SEC14L4Q9UDX3 406 aa14.27□□□□□ -0.13
CPSF6-203ENST00000456847 A0A087WUJ7 227 aa14.26□□□□□ -0.13
CPSF6-203ENST00000456847 LOC100653049A0A140TA62 436 aa14.26□□□□□ -0.13
CPSF6-203ENST00000456847 CPSF4LA6NMK7 179 aaKnown RBP14.26□□□□□ -0.13
CPSF6-203ENST00000456847 ABCD4O14678 606 aa14.26□□□□□ -0.13
CPSF6-203ENST00000456847 KRT34O76011 436 aa14.26□□□□□ -0.13
CPSF6-203ENST00000456847 NQO1P15559 274 aaKnown RBP14.26□□□□□ -0.13
CPSF6-203ENST00000456847 GRPRP30550 384 aa14.26□□□□□ -0.13
CPSF6-203ENST00000456847 SELENOPP49908 381 aa14.26□□□□□ -0.13
CPSF6-203ENST00000456847 CLDN17P56750 224 aa14.26□□□□□ -0.13
CPSF6-203ENST00000456847 NRF1Q16656 503 aa14.26□□□□□ -0.13
CPSF6-203ENST00000456847 PIAS4Q8N2W9 510 aaPredicted RBP14.26□□□□□ -0.13
CPSF6-203ENST00000456847 GPR32P1Q8NGA4 272 aa14.26□□□□□ -0.13
CPSF6-203ENST00000456847 C10orf82Q8WW14 230 aa14.26□□□□□ -0.13
CPSF6-203ENST00000456847 GID8Q9NWU2 228 aa14.26□□□□□ -0.13
CPSF6-203ENST00000456847 LAMP3Q9UQV4 416 aa14.26□□□□□ -0.13
CPSF6-203ENST00000456847 AMDHD2Q9Y303 409 aa14.26□□□□□ -0.13
CPSF6-203ENST00000456847 SLC25A15Q9Y619 301 aa14.26□□□□□ -0.13
CPSF6-203ENST00000456847 ZNF587BE7ETH6 402 aa14.25□□□□□ -0.13
CPSF6-203ENST00000456847 M0R1B8 84 aa14.25□□□□□ -0.13
CPSF6-203ENST00000456847 PDLIM1O00151 329 aa14.25□□□□□ -0.13
CPSF6-203ENST00000456847 FXYD1O00168 92 aa14.25□□□□□ -0.13
CPSF6-203ENST00000456847 NPPAP01160 153 aa14.25□□□□□ -0.13
CPSF6-203ENST00000456847 C8BP07358 591 aa14.25□□□□□ -0.13
CPSF6-203ENST00000456847 PTH2RP49190 550 aa14.25□□□□□ -0.13
CPSF6-203ENST00000456847 CDH11P55287 796 aa14.25□□□□□ -0.13
CPSF6-203ENST00000456847 CDH12P55289 794 aa14.25□□□□□ -0.13
CPSF6-203ENST00000456847 RPS4XP62701 263 aaKnown RBP14.25□□□□□ -0.13
CPSF6-203ENST00000456847 ZNF672Q499Z4 452 aaPredicted RBP14.25□□□□□ -0.13
CPSF6-203ENST00000456847 SWT1Q5T5J6 900 aaKnown RBP14.25□□□□□ -0.13
CPSF6-203ENST00000456847 TMEM108Q6UXF1 575 aa14.25□□□□□ -0.13
CPSF6-203ENST00000456847 KRTAP1-3Q8IUG1 177 aa14.25□□□□□ -0.13
CPSF6-203ENST00000456847 EPHX4Q8IUS5 362 aa14.25□□□□□ -0.13
CPSF6-203ENST00000456847 C17orf78Q8N4C9 275 aa14.25□□□□□ -0.13
CPSF6-203ENST00000456847 RASSF5Q8WWW0 418 aa14.25□□□□□ -0.13
CPSF6-203ENST00000456847 TAMM41Q96BW9 452 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms