RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 CALML5Q9NZT1 146 aa6.99□□□□□ -1.29
NIF3L1-209ENST00000454952 SLC17A7Q9P2U7 560 aa6.99□□□□□ -1.29
NIF3L1-209ENST00000454952 CRNNQ9UBG3 495 aaPredicted RBP6.99□□□□□ -1.29
NIF3L1-209ENST00000454952 ZDHHC2Q9UIJ5 367 aa6.99□□□□□ -1.29
NIF3L1-209ENST00000454952 BTNL2Q9UIR0 455 aa6.99□□□□□ -1.29
NIF3L1-209ENST00000454952 RASD1Q9Y272 281 aa6.99□□□□□ -1.29
NIF3L1-209ENST00000454952 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.99□□□□□ -1.29
NIF3L1-209ENST00000454952 A0A0A6YYJ9 748 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 IGHV1-18A0A0C4DH31 117 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 IGHV4-61A0A0C4DH41 118 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 SLC35F4A4IF30 521 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 LIPT2A6NK58 231 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 A8MVM7 634 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 E9PBE3 544 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 SLCO1B7G3V0H7 640 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 HMGN4O00479 90 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 SCN2BO60939 215 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 LY6HO94772 140 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 KRT75O95678 551 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 BPGMP07738 259 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 TACSTD2P09758 323 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 NR2F1P10589 423 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 DAOP14920 347 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 FOXG1P55316 489 aaPredicted RBP6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 SLC25A3Q00325 362 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 NAAAQ02083 359 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 FUT5Q11128 374 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 EPS8Q12929 822 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 CEACAM7Q14002 265 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 CASP8Q14790 479 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 OR7A5Q15622 319 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 ADIPOQQ15848 244 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 CR1LQ2VPA4 569 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 LIN52Q52LA3 116 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 HIKESHIQ53FT3 197 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 ARSJQ5FYB0 599 aaPredicted RBP6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 MRPL2Q5T653 305 aaKnown RBP6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 REP15Q6BDI9 236 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 WBP2NLQ6ICG8 309 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 ANKRD46Q86W74 232 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 NUDCD3Q8IVD9 361 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 TEX29Q8N6K0 151 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 LINC01356Q8N9X3 169 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 ZFAND2BQ8WV99 257 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 CNOT9Q92600 299 aaKnown RBP6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 AURKBQ96GD4 344 aaPredicted RBP6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 CCDC115Q96NT0 180 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 LINC00470Q9BZP3 86 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 ROPN1BQ9BZX4 212 aaPredicted RBP6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 BPESC1Q9GZL8 116 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 ADAM19Q9H013 955 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 AKTIPQ9H8T0 292 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 ROPN1Q9HAT0 212 aaPredicted RBP6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 THUMPD1Q9NXG2 353 aaKnown RBP6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 LGALS13Q9UHV8 139 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 RCE1Q9Y256 329 aa6.98□□□□□ -1.29
NIF3L1-209ENST00000454952 ZC3H12DA2A288 527 aaKnown RBP6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 TMEM247A6NEH6 219 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 CCDC154A6NI56 674 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 hCG_2039718K7EN88 272 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 AP3D1O14617 1153 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 KLF11O14901 512 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 AKAP8O43823 692 aaKnown RBP6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 BCAS1O75363 584 aaPredicted RBP6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 SPAG7O75391 227 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 AKR7A3O95154 331 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 AHSA1O95433 338 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 STAMBPO95630 424 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 LGI1O95970 557 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 IGLV1-44P01699 117 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 SERPINE1P05121 402 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 CECR9P0C854 216 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 CBR1P16152 277 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 LBPP18428 481 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 NPR2P20594 1047 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 RPS4Y1P22090 263 aaKnown RBP6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 APEX1P27695 318 aaKnown RBP6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 GTF2E2P29084 291 aaKnown RBP6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 ARR3P36575 388 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 POU3F1Q03052 451 aaPredicted RBP6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 LARS2Q15031 903 aaKnown RBP6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 PDCD2Q16342 344 aaPredicted RBP6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 FAM174BQ3ZCQ3 159 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 SPANXN4Q5MJ08 99 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 SAMD5Q5TGI4 173 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 PRAMEF8Q5VWM4 474 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 PRAMEF7Q5VXH5 474 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 VHLLQ6RSH7 139 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 IL17RELQ6ZVW7 336 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 OLIG3Q7RTU3 272 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 MEX3DQ86XN8 651 aaKnown RBP6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 RNF130Q86XS8 419 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 ZNF786Q8N393 782 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 TMEM99Q8N816 258 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 ANKS4BQ8N8V4 417 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 ZIC4Q8N9L1 334 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 STK35Q8TDR2 534 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 BCL2L2Q92843 193 aaPredicted RBP6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 ZG16BQ96DA0 208 aa6.97□□□□□ -1.29
NIF3L1-209ENST00000454952 DNAJA3Q96EY1 480 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms