RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 DMRTC2Q8IXT2 367 aaPredicted RBP24.85■■□□□ 1.57
SMARCC1-203ENST00000454240 OFCC1Q8IZS5 231 aa24.85■■□□□ 1.57
SMARCC1-203ENST00000454240 MOGAT1Q96PD6 335 aa24.85■■□□□ 1.57
SMARCC1-203ENST00000454240 ATP6V1B2P21281 511 aa24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 FUT4P22083 530 aa24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 GTF2E2P29084 291 aaKnown RBP24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 GRPRP30550 384 aa24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 IQCCQ4KMZ1 466 aa24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 LCN8Q6JVE9 175 aa24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 PGM2L1Q6PCE3 622 aa24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 TFAP2EQ6VUC0 442 aa24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 CYP2R1Q6VVX0 501 aa24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 TMEM255BQ8WV15 326 aa24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 ASB9Q96DX5 294 aa24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 HS6ST2Q96MM7 605 aa24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 MEPEQ9NQ76 525 aaPredicted RBP24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 MAN2C1Q9NTJ4 1040 aa24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 NDUFAF4Q9P032 175 aa24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 SEC14L4Q9UDX3 406 aa24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 RASD1Q9Y272 281 aa24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 B3GALT5Q9Y2C3 310 aa24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 CORINQ9Y5Q5 1042 aa24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 FLVCR1Q9Y5Y0 555 aa24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 V9GYQ6 96 aa24.84■■□□□ 1.57
SMARCC1-203ENST00000454240 LRRN3E7EW58 273 aa24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 M0R082 166 aa24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 ATP5HO75947 161 aa24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 MT-ATP6P00846 226 aa24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 CBLP22681 906 aa24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 NTF4P34130 210 aa24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 OR3A2P47893 321 aa24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 UGT2B15P54855 530 aa24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 VLDLRP98155 873 aa24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 MTX3Q5HYI7 312 aa24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 MEX3BQ6ZN04 569 aaKnown RBP24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 H1FNTQ75WM6 255 aaPredicted RBP24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 DHFR2Q86XF0 187 aa24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 ADPRHL1Q8NDY3 354 aa24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 OR9K2Q8NGE7 335 aa24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 ZNF417Q8TAU3 575 aa24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 TMEM239Q8WW34 195 aa24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 ZNF587Q96SQ5 575 aaPredicted RBP24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 FNDC11Q9BVV2 318 aa24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 ELOVL5Q9NYP7 299 aa24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 RHCGQ9UBD6 479 aa24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 NOSIPQ9Y314 301 aaKnown RBP24.83■■□□□ 1.57
SMARCC1-203ENST00000454240 DNAJC8O75937 253 aaPredicted RBP24.82■■□□□ 1.56
SMARCC1-203ENST00000454240 IGF2P01344 180 aa24.82■■□□□ 1.56
SMARCC1-203ENST00000454240 MT-ND1P03886 318 aa24.82■■□□□ 1.56
SMARCC1-203ENST00000454240 SORDQ00796 357 aa24.82■■□□□ 1.56
SMARCC1-203ENST00000454240 POU4F3Q15319 338 aa24.82■■□□□ 1.56
SMARCC1-203ENST00000454240 ZNF74Q16587 644 aa24.82■■□□□ 1.56
SMARCC1-203ENST00000454240 BEND4Q6ZU67 534 aa24.82■■□□□ 1.56
SMARCC1-203ENST00000454240 GPAT4Q86UL3 456 aa24.82■■□□□ 1.56
SMARCC1-203ENST00000454240 STK32CQ86UX6 486 aa24.82■■□□□ 1.56
SMARCC1-203ENST00000454240 CYP4Z1Q86W10 505 aa24.82■■□□□ 1.56
SMARCC1-203ENST00000454240 KIF18BQ86Y91 864 aa24.82■■□□□ 1.56
SMARCC1-203ENST00000454240 ZIC4Q8N9L1 334 aa24.82■■□□□ 1.56
SMARCC1-203ENST00000454240 SCAIQ8N9R8 606 aa24.82■■□□□ 1.56
SMARCC1-203ENST00000454240 CRYBG3Q68DQ2 2970 aa24.82■■□□□ 1.56
SMARCC1-203ENST00000454240 PKDREJQ9NTG1 2253 aa24.81■■□□□ 1.56
SMARCC1-203ENST00000454240 TCRBV5S2A0A599 114 aa24.81■■□□□ 1.56
SMARCC1-203ENST00000454240 KPNA4O00629 521 aaPredicted RBP24.81■■□□□ 1.56
SMARCC1-203ENST00000454240 ACOT8O14734 319 aa24.81■■□□□ 1.56
SMARCC1-203ENST00000454240 COX6B1P14854 86 aa24.81■■□□□ 1.56
SMARCC1-203ENST00000454240 RHCEP18577 417 aa24.81■■□□□ 1.56
SMARCC1-203ENST00000454240 EDNRAP25101 427 aa24.81■■□□□ 1.56
SMARCC1-203ENST00000454240 CD79BP40259 229 aa24.81■■□□□ 1.56
SMARCC1-203ENST00000454240 PEX19P40855 299 aa24.81■■□□□ 1.56
SMARCC1-203ENST00000454240 RASSF2P50749 326 aa24.81■■□□□ 1.56
SMARCC1-203ENST00000454240 FAM27E3Q08E93 113 aa24.81■■□□□ 1.56
SMARCC1-203ENST00000454240 TRAM2Q15035 370 aa24.81■■□□□ 1.56
SMARCC1-203ENST00000454240 C10orf53Q8N6V4 93 aa24.81■■□□□ 1.56
SMARCC1-203ENST00000454240 PIK3C3Q8NEB9 887 aa24.81■■□□□ 1.56
SMARCC1-203ENST00000454240 ASPNQ9BXN1 380 aa24.81■■□□□ 1.56
SMARCC1-203ENST00000454240 KLHL4Q9C0H6 718 aa24.81■■□□□ 1.56
SMARCC1-203ENST00000454240 MRPL39Q9NYK5 338 aaKnown RBP24.81■■□□□ 1.56
SMARCC1-203ENST00000454240 C6orf203Q9P0P8 240 aaPredicted RBP24.81■■□□□ 1.56
SMARCC1-203ENST00000454240 FAM32AQ9Y421 112 aaKnown RBP24.81■■□□□ 1.56
SMARCC1-203ENST00000454240 LOC102725191A0A1B0GVB3 256 aa24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 MS4A18H0YCH9 400 aa24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 hCG_2039718K7EN88 272 aa24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 GSC2O15499 205 aa24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 CH25HO95992 272 aa24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 CBX1P83916 185 aa24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 TRAP1Q12931 704 aaKnown RBP24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 FOXD4Q12950 439 aaPredicted RBP24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 MS4A18Q3C1V0 323 aa24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 ZNF787Q6DD87 383 aa24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 CREB3L2Q70SY1 520 aa24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 KDM8Q8N371 416 aa24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 PFN4Q8NHR9 129 aa24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 TMEM45BQ96B21 275 aa24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 CCDC124Q96CT7 223 aaKnown RBP24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 OXGR1Q96P68 337 aa24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 CADM1Q9BY67 442 aaKnown RBP24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 FKRPQ9H9S5 495 aa24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 NMNAT1Q9HAN9 279 aaPredicted RBP24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 B3GAT1Q9P2W7 334 aa24.8■■□□□ 1.56
SMARCC1-203ENST00000454240 MED31Q9Y3C7 131 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms