RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 SULT2B1O00204 365 aa13.05□□□□□ -0.32
VPS16-205ENST00000453689 FFAR1O14842 300 aa13.05□□□□□ -0.32
VPS16-205ENST00000453689 SMAD9O15198 467 aaKnown RBP13.05□□□□□ -0.32
VPS16-205ENST00000453689 DIRAS1O95057 198 aa13.05□□□□□ -0.32
VPS16-205ENST00000453689 PMS2P2O95744 297 aa13.05□□□□□ -0.32
VPS16-205ENST00000453689 MT-ND1P03886 318 aa13.05□□□□□ -0.32
VPS16-205ENST00000453689 KLK2P20151 261 aa13.05□□□□□ -0.32
VPS16-205ENST00000453689 KIR2DL3P43628 341 aa13.05□□□□□ -0.32
VPS16-205ENST00000453689 CLK1P49759 484 aaKnown RBP13.05□□□□□ -0.32
VPS16-205ENST00000453689 CSNK2A1P68400 391 aaPredicted RBP13.05□□□□□ -0.32
VPS16-205ENST00000453689 SORDQ00796 357 aa13.05□□□□□ -0.32
VPS16-205ENST00000453689 TLE4Q04727 773 aa13.05□□□□□ -0.32
VPS16-205ENST00000453689 MYBPHQ13203 477 aa13.05□□□□□ -0.32
VPS16-205ENST00000453689 RNPS1Q15287 305 aaKnown RBP13.05□□□□□ -0.32
VPS16-205ENST00000453689 ZNF474Q6S9Z5 364 aaPredicted RBP13.05□□□□□ -0.32
VPS16-205ENST00000453689 SLC43A2Q8N370 569 aa13.05□□□□□ -0.32
VPS16-205ENST00000453689 ZNF610Q8N9Z0 462 aa13.05□□□□□ -0.32
VPS16-205ENST00000453689 PAPD5Q8NDF8 572 aaKnown RBP13.05□□□□□ -0.32
VPS16-205ENST00000453689 PIK3C3Q8NEB9 887 aa13.05□□□□□ -0.32
VPS16-205ENST00000453689 STK35Q8TDR2 534 aa13.05□□□□□ -0.32
VPS16-205ENST00000453689 DUS3LQ96G46 650 aaKnown RBP13.05□□□□□ -0.32
VPS16-205ENST00000453689 PIP5K1AQ99755 562 aa13.05□□□□□ -0.32
VPS16-205ENST00000453689 CHID1Q9BWS9 393 aa13.05□□□□□ -0.32
VPS16-205ENST00000453689 YY1AP1Q9H869 796 aa13.05□□□□□ -0.32
VPS16-205ENST00000453689 PLSCR4Q9NRQ2 329 aa13.05□□□□□ -0.32
VPS16-205ENST00000453689 CCM2LQ9NUG4 571 aaPredicted RBP13.05□□□□□ -0.32
VPS16-205ENST00000453689 HDGFL3Q9Y3E1 203 aa13.05□□□□□ -0.32
VPS16-205ENST00000453689 ITPR2Q14571 2701 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 FBN2P35556 2912 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 IGKV1D-42A0A075B6H8 117 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 ZC3H12DA2A288 527 aaKnown RBP13.04□□□□□ -0.32
VPS16-205ENST00000453689 ANKRD65E5RJM6 399 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 CYTIPO60759 359 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 FKBP6O75344 327 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 H1F0P07305 194 aaKnown RBP13.04□□□□□ -0.32
VPS16-205ENST00000453689 RBM34P42696 430 aaKnown RBP13.04□□□□□ -0.32
VPS16-205ENST00000453689 SPIBQ01892 262 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 FAM27E3Q08E93 113 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 TRAM2Q15035 370 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 C5orf46Q6UWT4 87 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 LINC00114Q6XXX2 140 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 WDR88Q6ZMY6 472 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 TUSC5Q8IXB3 177 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 SLCO4A1Q96BD0 722 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 DHRS1Q96LJ7 313 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 PSD2Q9BQI7 771 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 PRSS27Q9BQR3 290 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 TMEM43Q9BTV4 400 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 ZNF426Q9BUY5 554 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 POTEKPQ9BYX7 375 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 ANKRD19PQ9H560 264 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 DENND2DQ9H6A0 471 aaPredicted RBP13.04□□□□□ -0.32
VPS16-205ENST00000453689 C12orf49Q9H741 205 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 NMNAT1Q9HAN9 279 aaPredicted RBP13.04□□□□□ -0.32
VPS16-205ENST00000453689 GP6Q9HCN6 339 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 MAN2C1Q9NTJ4 1040 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 CRIM1Q9NZV1 1036 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 KLHL13Q9P2N7 655 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 RHCGQ9UBD6 479 aa13.04□□□□□ -0.32
VPS16-205ENST00000453689 ING1Q9UK53 422 aaPredicted RBP13.04□□□□□ -0.32
VPS16-205ENST00000453689 A0A1W2PRQ8 180 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 TUBAL3A6NHL2 446 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 NPIPB7O75200 414 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 IMPDH2P12268 514 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 SMIM11AP58511 58 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 RASGEF1BQ0VAM2 473 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 DGCR6Q14129 220 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 TMEM201Q5SNT2 666 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 ABLIM2Q6H8Q1 611 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 TTC33Q6PID6 262 aaPredicted RBP13.03□□□□□ -0.32
VPS16-205ENST00000453689 ZNF771Q7L3S4 317 aaPredicted RBP13.03□□□□□ -0.32
VPS16-205ENST00000453689 NUFIP2Q7Z417 695 aaKnown RBP13.03□□□□□ -0.32
VPS16-205ENST00000453689 NKAIN4Q8IVV8 208 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 C10orf67Q8IYJ2 551 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 LINC01560Q8TB33 94 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 HS6ST2Q96MM7 605 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 EPYCQ99645 322 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 SLC19A3Q9BZV2 496 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 BCO1Q9HAY6 547 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 MCCC2Q9HCC0 563 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 KLHL9Q9P2J3 617 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 TRAPPC4Q9Y296 219 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 TESMINQ9Y4I5 508 aa13.03□□□□□ -0.32
VPS16-205ENST00000453689 APCP25054 2843 aa13.02□□□□□ -0.33
VPS16-205ENST00000453689 DNPH1O43598 174 aa13.02□□□□□ -0.33
VPS16-205ENST00000453689 AHSA1O95433 338 aa13.02□□□□□ -0.33
VPS16-205ENST00000453689 YES1P07947 543 aa13.02□□□□□ -0.33
VPS16-205ENST00000453689 POU2F1P14859 743 aa13.02□□□□□ -0.33
VPS16-205ENST00000453689 RRM2P31350 389 aa13.02□□□□□ -0.33
VPS16-205ENST00000453689 IDUAP35475 653 aa13.02□□□□□ -0.33
VPS16-205ENST00000453689 CD79BP40259 229 aa13.02□□□□□ -0.33
VPS16-205ENST00000453689 PCYT1AP49585 367 aa13.02□□□□□ -0.33
VPS16-205ENST00000453689 OR2B6P58173 313 aa13.02□□□□□ -0.33
VPS16-205ENST00000453689 EGR4Q05215 589 aa13.02□□□□□ -0.33
VPS16-205ENST00000453689 FGD3Q5JSP0 725 aa13.02□□□□□ -0.33
VPS16-205ENST00000453689 C1orf140Q5VVS0 124 aa13.02□□□□□ -0.33
VPS16-205ENST00000453689 OR2T5Q6IEZ7 315 aa13.02□□□□□ -0.33
VPS16-205ENST00000453689 OR2T29Q8NH02 315 aa13.02□□□□□ -0.33
VPS16-205ENST00000453689 FAM222BQ8WU58 562 aa13.02□□□□□ -0.33
VPS16-205ENST00000453689 TMEM255BQ8WV15 326 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms