RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 CYP2R1Q6VVX0 501 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 Q6ZS46 218 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 FCRLAQ7L513 359 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.79□□□□□ -1.16
COL28A1-205ENST00000453441 MAMDC2Q7Z304 686 aaPredicted RBP7.79□□□□□ -1.16
COL28A1-205ENST00000453441 GDF7Q7Z4P5 450 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 RBM45Q8IUH3 476 aaKnown RBP7.79□□□□□ -1.16
COL28A1-205ENST00000453441 MCEMP1Q8IX19 187 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 RNF113BQ8IZP6 322 aaKnown RBP7.79□□□□□ -1.16
COL28A1-205ENST00000453441 LINC00471Q8N535 108 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 SCAIQ8N9R8 606 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 ADPRHL1Q8NDY3 354 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 PIK3C3Q8NEB9 887 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 FNDC9Q8TBE3 224 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 RNF128Q8TEB7 428 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 SSC4DQ8WTU2 575 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 CCDC120Q96HB5 630 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 GMPPAQ96IJ6 420 aaPredicted RBP7.79□□□□□ -1.16
COL28A1-205ENST00000453441 CLPTM1LQ96KA5 538 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 C7orf34Q96L11 122 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 RAB3IPQ96QF0 476 aaPredicted RBP7.79□□□□□ -1.16
COL28A1-205ENST00000453441 ZNF300Q96RE9 604 aaPredicted RBP7.79□□□□□ -1.16
COL28A1-205ENST00000453441 PIP5K1AQ99755 562 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 WFDC6Q9BQY6 131 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 SF3B5Q9BWJ5 86 aaKnown RBP7.79□□□□□ -1.16
COL28A1-205ENST00000453441 AMBRA1Q9C0C7 1298 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 PIGMQ9H3S5 423 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 KRCC1Q9NPI7 259 aaPredicted RBP7.79□□□□□ -1.16
COL28A1-205ENST00000453441 FANCFQ9NPI8 374 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 NDUFAF4Q9P032 175 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 EMC3Q9P0I2 261 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 SLC7A8Q9UHI5 535 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 SLC7A7Q9UM01 511 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 A4GNTQ9UNA3 340 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 B3GALT5Q9Y2C3 310 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 EMC9Q9Y3B6 208 aa7.79□□□□□ -1.16
COL28A1-205ENST00000453441 USP9XQ93008 2570 aaPredicted RBP7.79□□□□□ -1.16
COL28A1-205ENST00000453441 INTS1Q8N201 2190 aaKnown RBP7.78□□□□□ -1.16
COL28A1-205ENST00000453441 MED12LQ86YW9 2145 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 IGKV1D-42A0A075B6H8 117 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 IGKV3D-15A0A087WSY6 115 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 A0A1W2PRQ8 180 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 DHRS12A0PJE2 317 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 ZNF724A8MTY0 619 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 FTCDNL1E5RQL4 147 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 H0YC42 278 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 CYTIPO60759 359 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 SS18L1O75177 396 aaPredicted RBP7.78□□□□□ -1.16
COL28A1-205ENST00000453441 KRT36O76013 467 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 LYPD3O95274 346 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 PLGP00747 810 aaPredicted RBP7.78□□□□□ -1.16
COL28A1-205ENST00000453441 LDLRP01130 860 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 H1F0P07305 194 aaKnown RBP7.78□□□□□ -1.16
COL28A1-205ENST00000453441 TMIGD3P0DMS9 266 aaPredicted RBP7.78□□□□□ -1.16
COL28A1-205ENST00000453441 RAP2AP10114 183 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 CCNA2P20248 432 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 TNFRSF1BP20333 461 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 SHC1P29353 583 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 MSX2P35548 267 aaPredicted RBP7.78□□□□□ -1.16
COL28A1-205ENST00000453441 PCYT1AP49585 367 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 SLC16A1P53985 500 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 TPD52P55327 224 aaPredicted RBP7.78□□□□□ -1.16
COL28A1-205ENST00000453441 OR2B6P58173 313 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 H3F3AP84243 136 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 MS4A2Q01362 244 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 EGR4Q05215 589 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 PIN1Q13526 163 aaPredicted RBP7.78□□□□□ -1.16
COL28A1-205ENST00000453441 DGCR6Q14129 220 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 ANKDD1AQ495B1 522 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 ABLIM2Q6H8Q1 611 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 SEM1Q6ZVN7 128 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 RRM2BQ7LG56 351 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 MRGPRGQ86SM5 289 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 ZDHHC21Q8IVQ6 265 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 C9orf106Q8NAJ2 232 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 OR10Q1Q8NGQ4 319 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 TMEM239Q8WW34 195 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 ACOT11Q8WXI4 607 aaPredicted RBP7.78□□□□□ -1.16
COL28A1-205ENST00000453441 ZNF845Q96IR2 970 aaPredicted RBP7.78□□□□□ -1.16
COL28A1-205ENST00000453441 ARL5BQ96KC2 179 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 MEGF10Q96KG7 1140 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 DHRS1Q96LJ7 313 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 PRSS27Q9BQR3 290 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 ASPNQ9BXN1 380 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 SRXN1Q9BYN0 137 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 OR11A1Q9GZK7 315 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 FKRPQ9H9S5 495 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 BCO1Q9HAY6 547 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 RASD1Q9Y272 281 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 TMEM5Q9Y2B1 443 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 MED31Q9Y3C7 131 aa7.78□□□□□ -1.16
COL28A1-205ENST00000453441 A0A0G2JNJ9 132 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 LOC102725191A0A1B0GVB3 256 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 TCRBV3S1A0A5B6 114 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 ZC3H12DA2A288 527 aaKnown RBP7.77□□□□□ -1.17
COL28A1-205ENST00000453441 AQP7P3A6NL99 342 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 SMAD9O15198 467 aaKnown RBP7.77□□□□□ -1.17
COL28A1-205ENST00000453441 ZNHIT1O43257 154 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 SEMA7AO75326 666 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 TOXO94900 526 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms