RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 TEAD3Q99594 435 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 SDHCQ99643 169 aaPredicted RBP9.77□□□□□ -0.85
PKP4-206ENST00000452162 OR8D2Q9GZM6 311 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 ISG20L2Q9H9L3 353 aaKnown RBP9.77□□□□□ -0.85
PKP4-206ENST00000452162 ZNF304Q9HCX3 659 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 EXOSC3Q9NQT5 275 aaKnown RBP9.77□□□□□ -0.85
PKP4-206ENST00000452162 POLE4Q9NR33 117 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 INPP5EQ9NRR6 644 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 SRPK3Q9UPE1 567 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 PCDHGB6Q9Y5F9 930 aa9.77□□□□□ -0.85
PKP4-206ENST00000452162 MRPS18BQ9Y676 258 aaKnown RBP9.77□□□□□ -0.85
PKP4-206ENST00000452162 IGKV1D-42A0A075B6H8 117 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 LOC110117498-PIK3R3F6TDL0 507 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 TERTO14746 1132 aaKnown RBP9.76□□□□□ -0.85
PKP4-206ENST00000452162 PPM1BO75688 479 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 NDUFB2O95178 105 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 SNX4O95219 450 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 UTS2O95399 124 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 GTF2E2P29084 291 aaKnown RBP9.76□□□□□ -0.85
PKP4-206ENST00000452162 SDC2P34741 201 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 DLSTP36957 453 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 SLC9A3P48764 834 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 COPZ1P61923 177 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 PSPHP78330 225 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 YOD1Q5VVQ6 348 aaPredicted RBP9.76□□□□□ -0.85
PKP4-206ENST00000452162 APOOLQ6UXV4 268 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 TMPRSS11AQ6ZMR5 421 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 KLBQ86Z14 1044 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 GATSQ8NAP1 163 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 ZNF527Q8NB42 609 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 ATP6V1C2Q8NEY4 427 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 OR5M3Q8NGP4 307 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 ASB15Q8WXK1 588 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 DCLRE1CQ96SD1 692 aaKnown RBP9.76□□□□□ -0.85
PKP4-206ENST00000452162 COQ7Q99807 217 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 SLC30A2Q9BRI3 323 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 ALG8Q9BVK2 526 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 NUDT9Q9BW91 350 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 SLC19A3Q9BZV2 496 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 RERGLQ9H628 205 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 ADGRL4Q9HBW9 690 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 CPNE5Q9HCH3 593 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 ASB6Q9NWX5 421 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 PLEKHB1Q9UF11 243 aaPredicted RBP9.76□□□□□ -0.85
PKP4-206ENST00000452162 CLCA3PQ9Y6N3 262 aa9.76□□□□□ -0.85
PKP4-206ENST00000452162 A0A1B0GX78 115 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 SLC35F4A4IF30 521 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 DYRK3O43781 588 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 REM1O75628 298 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 OR7A10O76100 309 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 IFNGP01579 166 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 CLUP10909 449 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 UBL4AP11441 157 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 CELP19835 753 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 HNRNPA0Q13151 305 aaKnown RBP9.75□□□□□ -0.85
PKP4-206ENST00000452162 GALEQ14376 348 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 VWA2Q5GFL6 755 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 FAM69BQ5VUD6 431 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 WBP2NLQ6ICG8 309 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 FAM198BQ6UWH4 519 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 LRRC17Q8N6Y2 441 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 CYB561A3Q8NBI2 242 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 ERMAPQ96PL5 475 aaPredicted RBP9.75□□□□□ -0.85
PKP4-206ENST00000452162 KATNB1Q9BVA0 655 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 OR51V1Q9H2C8 321 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 TPK1Q9H3S4 243 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 SLC22A11Q9NSA0 550 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 HAO2Q9NYQ3 351 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 FBXL4Q9UKA2 621 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 TRAPPC4Q9Y296 219 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 MCIDASD6RGH6 385 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 LRRN3E7EW58 273 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 SCDO00767 359 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 SBK2P0C263 348 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 FOXL2P58012 376 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 RPS18P62269 152 aaKnown RBP9.75□□□□□ -0.85
PKP4-206ENST00000452162 RPS4XP62701 263 aaKnown RBP9.75□□□□□ -0.85
PKP4-206ENST00000452162 DCDP81605 110 aaKnown RBP9.75□□□□□ -0.85
PKP4-206ENST00000452162 RUNX1T1Q06455 604 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 CDC20Q12834 499 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 EBPQ15125 230 aaKnown RBP9.75□□□□□ -0.85
PKP4-206ENST00000452162 NKAIN1Q4KMZ8 207 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 ARHGAP40Q5TG30 622 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 ATG4DQ86TL0 474 aaPredicted RBP9.75□□□□□ -0.85
PKP4-206ENST00000452162 LAX1Q8IWV1 398 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 C9orf40Q8IXQ3 194 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 C7orf57Q8NEG2 295 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 OR14A16Q8NHC5 309 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 CEP19Q96LK0 163 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 TBX5Q99593 518 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 TMED9Q9BVK6 235 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 SP140LQ9H930 580 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 BABAM2Q9NXR7 383 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 GSTK1Q9Y2Q3 226 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 CMAHPQ9Y471 501 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 SIRT4Q9Y6E7 314 aaPredicted RBP9.75□□□□□ -0.85
PKP4-206ENST00000452162 V9GYH0 126 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 HEATR5AQ86XA9 2040 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 MED13Q9UHV7 2174 aa9.75□□□□□ -0.85
PKP4-206ENST00000452162 DAPL1A0PJW8 107 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms