RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 ANKRD27Q96NW4 1050 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 ZNF607Q96SK3 696 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 SLCO5A1Q9H2Y9 848 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 EVA1AQ9H8M9 152 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 NPHS2Q9NP85 383 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 MGAT4BQ9UQ53 548 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 NDUFAF1Q9Y375 327 aa17.03■□□□□ 0.32
USP40-207ENST00000450940 A0A1B0GWA3 101 aa17.02■□□□□ 0.32
USP40-207ENST00000450940 ELOA3DA6NLF2 546 aaPredicted RBP17.02■□□□□ 0.32
USP40-207ENST00000450940 FAM171A2A8MVW0 826 aa17.02■□□□□ 0.32
USP40-207ENST00000450940 ABCD4O14678 606 aa17.02■□□□□ 0.32
USP40-207ENST00000450940 SERPINB7O75635 380 aa17.02■□□□□ 0.32
USP40-207ENST00000450940 HOXB4P17483 251 aaPredicted RBP17.02■□□□□ 0.32
USP40-207ENST00000450940 PCBP3P57721 371 aaKnown RBP17.02■□□□□ 0.32
USP40-207ENST00000450940 TGFBR3Q03167 851 aa17.02■□□□□ 0.32
USP40-207ENST00000450940 RBBP4Q09028 425 aa17.02■□□□□ 0.32
USP40-207ENST00000450940 ELOA3BQ3SY89 546 aa17.02■□□□□ 0.32
USP40-207ENST00000450940 FAM91A1Q658Y4 838 aa17.02■□□□□ 0.32
USP40-207ENST00000450940 KLHL17Q6TDP4 642 aa17.02■□□□□ 0.32
USP40-207ENST00000450940 DHDDSQ86SQ9 333 aa17.02■□□□□ 0.32
USP40-207ENST00000450940 GPAT4Q86UL3 456 aa17.02■□□□□ 0.32
USP40-207ENST00000450940 DTX2Q86UW9 622 aa17.02■□□□□ 0.32
USP40-207ENST00000450940 ELOA3Q8NG57 546 aa17.02■□□□□ 0.32
USP40-207ENST00000450940 SLC38A4Q969I6 547 aa17.02■□□□□ 0.32
USP40-207ENST00000450940 KTI12Q96EK9 354 aaPredicted RBP17.02■□□□□ 0.32
USP40-207ENST00000450940 CGREF1Q99674 301 aa17.02■□□□□ 0.32
USP40-207ENST00000450940 SLC17A5Q9NRA2 495 aa17.02■□□□□ 0.32
USP40-207ENST00000450940 CISD1Q9NZ45 108 aaKnown RBP17.02■□□□□ 0.32
USP40-207ENST00000450940 RPS6KB2Q9UBS0 482 aa17.02■□□□□ 0.32
USP40-207ENST00000450940 H7C1Q1 480 aa17.01■□□□□ 0.31
USP40-207ENST00000450940 OR2T1O43869 369 aa17.01■□□□□ 0.31
USP40-207ENST00000450940 MFN2O95140 757 aa17.01■□□□□ 0.31
USP40-207ENST00000450940 CD8AP01732 235 aa17.01■□□□□ 0.31
USP40-207ENST00000450940 PNMTP11086 282 aa17.01■□□□□ 0.31
USP40-207ENST00000450940 CD40P25942 277 aa17.01■□□□□ 0.31
USP40-207ENST00000450940 ATP5J2P56134 94 aa17.01■□□□□ 0.31
USP40-207ENST00000450940 ULK3Q6PHR2 472 aa17.01■□□□□ 0.31
USP40-207ENST00000450940 NET1Q7Z628 596 aaPredicted RBP17.01■□□□□ 0.31
USP40-207ENST00000450940 TESQ9UGI8 421 aaKnown RBP17.01■□□□□ 0.31
USP40-207ENST00000450940 AMDHD2Q9Y303 409 aa17.01■□□□□ 0.31
USP40-207ENST00000450940 MAGED1Q9Y5V3 778 aaPredicted RBP17.01■□□□□ 0.31
USP40-207ENST00000450940 IGKV1D-42A0A075B6H8 117 aa17■□□□□ 0.31
USP40-207ENST00000450940 LOC102725191A0A1B0GVB3 256 aa17■□□□□ 0.31
USP40-207ENST00000450940 TRIM64A6NGJ6 449 aa17■□□□□ 0.31
USP40-207ENST00000450940 TRIM64BA6NI03 449 aa17■□□□□ 0.31
USP40-207ENST00000450940 OR6C65A6NJZ3 312 aa17■□□□□ 0.31
USP40-207ENST00000450940 ANGPT2O15123 496 aa17■□□□□ 0.31
USP40-207ENST00000450940 TPST2O60704 377 aa17■□□□□ 0.31
USP40-207ENST00000450940 RPS5P46782 204 aaKnown RBP17■□□□□ 0.31
USP40-207ENST00000450940 ZNF83P51522 516 aa17■□□□□ 0.31
USP40-207ENST00000450940 DMTNQ08495 405 aa17■□□□□ 0.31
USP40-207ENST00000450940 ALG10BQ5I7T1 473 aa17■□□□□ 0.31
USP40-207ENST00000450940 FAM69AQ5T7M9 428 aa17■□□□□ 0.31
USP40-207ENST00000450940 ABHD12BQ7Z5M8 362 aaPredicted RBP17■□□□□ 0.31
USP40-207ENST00000450940 ARMC8Q8IUR7 673 aa17■□□□□ 0.31
USP40-207ENST00000450940 C11orf65Q8NCR3 313 aa17■□□□□ 0.31
USP40-207ENST00000450940 OR6S1Q8NH40 331 aa17■□□□□ 0.31
USP40-207ENST00000450940 TAAR8Q969N4 342 aa17■□□□□ 0.31
USP40-207ENST00000450940 SLC25A36Q96CQ1 311 aa17■□□□□ 0.31
USP40-207ENST00000450940 SLC47A1Q96FL8 570 aa17■□□□□ 0.31
USP40-207ENST00000450940 TRMT61AQ96FX7 289 aaKnown RBP17■□□□□ 0.31
USP40-207ENST00000450940 TRAF4Q9BUZ4 470 aaPredicted RBP17■□□□□ 0.31
USP40-207ENST00000450940 PRR14Q9BWN1 585 aa17■□□□□ 0.31
USP40-207ENST00000450940 LINC00470Q9BZP3 86 aa17■□□□□ 0.31
USP40-207ENST00000450940 KAT8Q9H7Z6 458 aaKnown RBP17■□□□□ 0.31
USP40-207ENST00000450940 ANGPT4Q9Y264 503 aa17■□□□□ 0.31
USP40-207ENST00000450940 B3GALT5Q9Y2C3 310 aa17■□□□□ 0.31
USP40-207ENST00000450940 NAV3Q8IVL0 2385 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 A0A087WUJ7 227 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 A0A0B4J2E0 115 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 A0A0G2JND7 137 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 A0A1B0GX12 115 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 A0A1W2PR80 420 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 ZNF432O94892 652 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 HEXAP06865 529 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 C8BP07358 591 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 SELENOPP49908 381 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 CDH11P55287 796 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 SLC25A3Q00325 362 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 SELPLGQ14242 412 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 ETFDHQ16134 617 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 C9orf135Q5VTT2 229 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 CLEC9AQ6UXN8 241 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 OXGR1Q96P68 337 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 WFDC6Q9BQY6 131 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 FAIMQ9NVQ4 179 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 B3GAT1Q9P2W7 334 aa16.99■□□□□ 0.31
USP40-207ENST00000450940 TLN2Q9Y4G6 2542 aa16.98■□□□□ 0.31
USP40-207ENST00000450940 TRAV36DV7A0A075B6V5 113 aa16.98■□□□□ 0.31
USP40-207ENST00000450940 E7EQL1 145 aa16.98■□□□□ 0.31
USP40-207ENST00000450940 FMO6PO60774 539 aa16.98■□□□□ 0.31
USP40-207ENST00000450940 LY6G6DO95868 133 aa16.98■□□□□ 0.31
USP40-207ENST00000450940 LGI1O95970 557 aa16.98■□□□□ 0.31
USP40-207ENST00000450940 AQP1P29972 269 aa16.98■□□□□ 0.31
USP40-207ENST00000450940 RGS8P57771 180 aaPredicted RBP16.98■□□□□ 0.31
USP40-207ENST00000450940 MTPNP58546 118 aa16.98■□□□□ 0.31
USP40-207ENST00000450940 PRPS1P60891 318 aa16.98■□□□□ 0.31
USP40-207ENST00000450940 LTBQ06643 244 aa16.98■□□□□ 0.31
USP40-207ENST00000450940 OR1Q1Q15612 314 aa16.98■□□□□ 0.31
USP40-207ENST00000450940 SWT1Q5T5J6 900 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms