RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 NR2C1P13056 603 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 FASP25445 335 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 FOXN2P32314 431 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 CFHR2P36980 270 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 YAP1P46937 504 aaKnown RBP3.16□□□□□ -1.9
PMS1-216ENST00000447734 ARHGDIAP52565 204 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 LIM2P55344 173 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 LRRC63Q05C16 580 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 DPYSL3Q14195 570 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 IZUMO4Q1ZYL8 232 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 C18orf21Q32NC0 220 aaPredicted RBP3.16□□□□□ -1.9
PMS1-216ENST00000447734 CARD16Q5EG05 197 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 ZNF57Q68EA5 555 aaPredicted RBP3.16□□□□□ -1.9
PMS1-216ENST00000447734 CLEC6AQ6EIG7 209 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 ASCL4Q6XD76 172 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 CERS6Q6ZMG9 384 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 Q6ZSR9 355 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 TRMT10CQ7L0Y3 403 aaKnown RBP3.16□□□□□ -1.9
PMS1-216ENST00000447734 FAM122BQ7Z309 247 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 APRG1Q8IVJ8 170 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 LRRC8AQ8IWT6 810 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 MYOCDQ8IZQ8 938 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 OR4D6Q8NGJ1 314 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 LYPD6BQ8NI32 183 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 TCP10LQ8TDR4 215 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 CAPSLQ8WWF8 208 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 CRYGNQ8WXF5 182 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 GTF3AQ92664 365 aaKnown RBP3.16□□□□□ -1.9
PMS1-216ENST00000447734 ITFG2Q969R8 447 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 NABP1Q96AH0 204 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 MED30Q96HR3 178 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 C9orf72Q96LT7 481 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 ZNF317Q96PQ6 595 aaPredicted RBP3.16□□□□□ -1.9
PMS1-216ENST00000447734 HSD17B14Q9BPX1 270 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 LZTS2Q9BRK4 669 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 CLEC7AQ9BXN2 247 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 ACTR3CQ9C0K3 210 aaPredicted RBP3.16□□□□□ -1.9
PMS1-216ENST00000447734 NDEL1Q9GZM8 345 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 NEUROG2Q9H2A3 272 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 HIPK2Q9H2X6 1198 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 PIGUQ9H490 435 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 C6orf106Q9H6K1 298 aaPredicted RBP3.16□□□□□ -1.9
PMS1-216ENST00000447734 FGF20Q9NP95 211 aaPredicted RBP3.16□□□□□ -1.9
PMS1-216ENST00000447734 ZNF275Q9NSD4 429 aaPredicted RBP3.16□□□□□ -1.9
PMS1-216ENST00000447734 ABCC13Q9NSE7 274 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 ABCD2Q9UBJ2 740 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 UXTQ9UBK9 157 aaPredicted RBP3.16□□□□□ -1.9
PMS1-216ENST00000447734 MLXQ9UH92 298 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 LSM7Q9UK45 103 aaKnown RBP3.16□□□□□ -1.9
PMS1-216ENST00000447734 RARRES3Q9UL19 164 aa3.16□□□□□ -1.9
PMS1-216ENST00000447734 RPL36Q9Y3U8 105 aaKnown RBP3.16□□□□□ -1.9
PMS1-216ENST00000447734 TRIP12Q14669 1992 aaPredicted RBP3.15□□□□□ -1.91
PMS1-216ENST00000447734 TRGV8A0A0C4DH27 118 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 IGHV3-38A0A0C4DH36 116 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 TEX48A0A1B0GUV7 120 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 MEX3AA1L020 520 aaKnown RBP3.15□□□□□ -1.91
PMS1-216ENST00000447734 TRPC5OSA6NMA1 111 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 CENPXA8MT69 81 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 GFYI3L273 518 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 ZBTB5O15062 677 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 BUB3O43684 328 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 CALUO43852 315 aaPredicted RBP3.15□□□□□ -1.91
PMS1-216ENST00000447734 UGT1A9O60656 530 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 CBR3O75828 277 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 CLDN1O95832 211 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 IGHV3-9P01782 118 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 IGHG1P01857 330 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 C2P06681 752 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 DCNP07585 359 aaKnown RBP3.15□□□□□ -1.91
PMS1-216ENST00000447734 HOXD4P09016 255 aaPredicted RBP3.15□□□□□ -1.91
PMS1-216ENST00000447734 PVRP15151 417 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 NQO2P16083 231 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 MGMTP16455 207 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 PRKACGP22612 351 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 HTR1FP30939 366 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 CALCRP30988 508 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 EPHX2P34913 555 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 SLC26A3P40879 764 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 GPR1P46091 355 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 ATP5J2P56134 94 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 RPS14P62263 151 aaKnown RBP3.15□□□□□ -1.91
PMS1-216ENST00000447734 SNRPD1P62314 119 aaKnown RBP3.15□□□□□ -1.91
PMS1-216ENST00000447734 SRPXP78539 464 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 CYCSP99999 105 aaKnown RBP3.15□□□□□ -1.91
PMS1-216ENST00000447734 ZNF33AQ06730 810 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 NCF4Q15080 339 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 CNPY1Q3B7I2 92 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 NADSYN1Q6IA69 706 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 C19orf48Q6RUI8 117 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 SPESP1Q6UW49 350 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 PRSS57Q6UWY2 283 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 SLC26A9Q7LBE3 791 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 PID1Q7Z2X4 250 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 APOBEC3FQ8IUX4 373 aaKnown RBP3.15□□□□□ -1.91
PMS1-216ENST00000447734 CMTM1Q8IZ96 169 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 SLC39A11Q8N1S5 342 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 LIX1Q8N485 282 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 TRAM1L1Q8N609 369 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 ZNF491Q8N8L2 437 aa3.15□□□□□ -1.91
PMS1-216ENST00000447734 OR10H4Q8NGA5 316 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms