RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 ZNF835Q9Y2P0 537 aa15.41■□□□□ 0.06
LIME1-202ENST00000444951 MAGED1Q9Y5V3 778 aaPredicted RBP15.41■□□□□ 0.06
LIME1-202ENST00000444951 KLF2Q9Y5W3 355 aaPredicted RBP15.41■□□□□ 0.06
LIME1-202ENST00000444951 TACC2O95359 2948 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 LIPT2A6NK58 231 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 CLCA1A8K7I4 914 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 KDM4EB2RXH2 506 aaPredicted RBP15.4■□□□□ 0.06
LIME1-202ENST00000444951 AKR7A3O95154 331 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 SYNGR4O95473 234 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 PMS2P2O95744 297 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 BGLAPP02818 100 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 POU2F1P14859 743 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 ZNF23P17027 643 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 KLK2P20151 261 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 MAKP20794 623 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 PRKACGP22612 351 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 GRPRP30550 384 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 HMGA2P52926 109 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 CSNK2A1P68400 391 aaPredicted RBP15.4■□□□□ 0.06
LIME1-202ENST00000444951 SLC35A1P78382 337 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 IL1RL1Q01638 556 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 PRKCDQ05655 676 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 LTBQ06643 244 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 MICAQ29983 383 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 EMC4Q5J8M3 183 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 FAM69AQ5T7M9 428 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 RNF113BQ8IZP6 322 aaKnown RBP15.4■□□□□ 0.06
LIME1-202ENST00000444951 PQLC1Q8N2U9 271 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 LRRC17Q8N6Y2 441 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 OR10G2Q8NGC3 310 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 GIPC3Q8TF64 312 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 ROBO4Q8WZ75 1007 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 CENPNQ96H22 339 aaPredicted RBP15.4■□□□□ 0.06
LIME1-202ENST00000444951 PRRG4Q9BZD6 226 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 KRCC1Q9NPI7 259 aaPredicted RBP15.4■□□□□ 0.06
LIME1-202ENST00000444951 SEC14L4Q9UDX3 406 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 POLQO75417 2590 aa15.4■□□□□ 0.06
LIME1-202ENST00000444951 DNAJC13O75165 2243 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 EFCAB9A8MZ26 197 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 C19orf84I3L1E1 186 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 OR2T1O43869 369 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 OR7A10O76100 309 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 SAGP10523 405 aaPredicted RBP15.39■□□□□ 0.05
LIME1-202ENST00000444951 ANPEPP15144 967 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 ARHGDIAP52565 204 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 PON3Q15166 354 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 ZNF74Q16587 644 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 RPTNQ6XPR3 784 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 Q6ZPB1 254 aaPredicted RBP15.39■□□□□ 0.05
LIME1-202ENST00000444951 P4HA3Q7Z4N8 544 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 AQP11Q8NBQ7 271 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 OR5K1Q8NHB7 308 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 MFSD8Q8NHS3 518 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 GTPBP3Q969Y2 492 aaKnown RBP15.39■□□□□ 0.05
LIME1-202ENST00000444951 ZHX1-C8orf76Q96EF9 292 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 UCN2Q96RP3 112 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 ASPNQ9BXN1 380 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 NANSQ9NR45 359 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 TRAPPC4Q9Y296 219 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 CELSR1Q9NYQ6 3014 aa15.39■□□□□ 0.05
LIME1-202ENST00000444951 FIGNL2A6NMB9 653 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 AHRRA9YTQ3 701 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 FTCDNL1E5RQL4 147 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 G3V2T6 193 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 M0R082 166 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 HIST1H2ABP04908 130 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 ENPP1P22413 925 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 IFNGR2P38484 337 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 CTBP2P56545 445 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 NUP107P57740 925 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 RAC3P60763 192 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 ACSF3Q4G176 576 aaPredicted RBP15.38■□□□□ 0.05
LIME1-202ENST00000444951 OTUD3Q5T2D3 398 aaPredicted RBP15.38■□□□□ 0.05
LIME1-202ENST00000444951 ANKRD34AQ69YU3 496 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 PGBD2Q6P3X8 592 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 SHQ1Q6PI26 577 aaKnown RBP15.38■□□□□ 0.05
LIME1-202ENST00000444951 HIST3H2AQ7L7L0 130 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 SLC46A3Q7Z3Q1 461 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 ZER1Q7Z7L7 766 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 STK32CQ86UX6 486 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 DOLPP1Q86YN1 238 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 CCDC103Q8IW40 242 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 TMEM99Q8N816 258 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 OR13C2Q8NGS9 318 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 ZNF417Q8TAU3 575 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 FNDC9Q8TBE3 224 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 ZPLD1Q8TCW7 415 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 HIST1H2ACQ93077 130 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 CPNE4Q96A23 557 aaPredicted RBP15.38■□□□□ 0.05
LIME1-202ENST00000444951 ZNF587Q96SQ5 575 aaPredicted RBP15.38■□□□□ 0.05
LIME1-202ENST00000444951 NAA11Q9BSU3 229 aaPredicted RBP15.38■□□□□ 0.05
LIME1-202ENST00000444951 KLHL13Q9P2N7 655 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 MCTS1Q9ULC4 181 aaKnown RBP15.38■□□□□ 0.05
LIME1-202ENST00000444951 OAZ3Q9UMX2 235 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 TMEM5Q9Y2B1 443 aa15.38■□□□□ 0.05
LIME1-202ENST00000444951 MPDZO75970 2070 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 SLC22A20A6NK97 555 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 ZNF814B7Z6K7 855 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 WDR1O75083 606 aa15.37■□□□□ 0.05
LIME1-202ENST00000444951 MT-ATP6P00846 226 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms