RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 HIKESHIQ53FT3 197 aa10.31□□□□□ -0.76
TTC28-203ENST00000442232 HMBOX1Q6NT76 420 aa10.31□□□□□ -0.76
TTC28-203ENST00000442232 NIPAL3Q6P499 406 aa10.31□□□□□ -0.76
TTC28-203ENST00000442232 B3GLCTQ6Y288 498 aa10.31□□□□□ -0.76
TTC28-203ENST00000442232 DNM1P46Q6ZS02 220 aa10.31□□□□□ -0.76
TTC28-203ENST00000442232 CXXC5Q7LFL8 322 aaKnown RBP10.31□□□□□ -0.76
TTC28-203ENST00000442232 SERPINA11Q86U17 422 aa10.31□□□□□ -0.76
TTC28-203ENST00000442232 KRT73Q86Y46 540 aa10.31□□□□□ -0.76
TTC28-203ENST00000442232 WDR31Q8NA23 367 aa10.31□□□□□ -0.76
TTC28-203ENST00000442232 OR9I1Q8NGQ6 314 aa10.31□□□□□ -0.76
TTC28-203ENST00000442232 SLC35B4Q969S0 331 aa10.31□□□□□ -0.76
TTC28-203ENST00000442232 VPS33AQ96AX1 596 aa10.31□□□□□ -0.76
TTC28-203ENST00000442232 C3orf49Q96BT1 292 aa10.31□□□□□ -0.76
TTC28-203ENST00000442232 SLC25A36Q96CQ1 311 aa10.31□□□□□ -0.76
TTC28-203ENST00000442232 ZNF385AQ96PM9 386 aaKnown RBP10.31□□□□□ -0.76
TTC28-203ENST00000442232 ALKBH3Q96Q83 286 aaPredicted RBP10.31□□□□□ -0.76
TTC28-203ENST00000442232 SLC6A13Q9NSD5 602 aa10.31□□□□□ -0.76
TTC28-203ENST00000442232 CLIC1O00299 241 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 KLF11O14901 512 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 LGI1O95970 557 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 CRYAAP02489 173 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 ZNF43P17038 809 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 PPIBP23284 216 aaKnown RBP10.3□□□□□ -0.76
TTC28-203ENST00000442232 SELENOPP49908 381 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 EFNA4P52798 201 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 MVDP53602 400 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 SLC25A3Q00325 362 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 C1DQ13901 141 aaKnown RBP10.3□□□□□ -0.76
TTC28-203ENST00000442232 TBRG1Q3YBR2 411 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 CHRFAM7AQ494W8 412 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 PODNL1Q6PEZ8 512 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 C5orf46Q6UWT4 87 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 SLC46A3Q7Z3Q1 461 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 CLIP4Q8N3C7 705 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 ZNF525Q8N782 197 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 OR1K1Q8NGR3 316 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 MFSD8Q8NHS3 518 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 HTRA1Q92743 480 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 SLC38A4Q969I6 547 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 FBXO17Q96EF6 278 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 ZNF317Q96PQ6 595 aaPredicted RBP10.3□□□□□ -0.76
TTC28-203ENST00000442232 SLC38A2Q96QD8 506 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 OR52B2Q96RD2 323 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 SPATA5L1Q9BVQ7 753 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 A4GALTQ9NPC4 353 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 SLC13A4Q9UKG4 626 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 ADAM21Q9UKJ8 722 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 MOKQ9UQ07 419 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 PCDHB14Q9Y5E9 798 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 USH1CQ9Y6N9 552 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 RTTNQ86VV8 2226 aa10.3□□□□□ -0.76
TTC28-203ENST00000442232 ALPK2Q86TB3 2170 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 VSTM5A8MXK1 200 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 TMEM229AB2RXF0 380 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 AIM2O14862 343 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 OR2T1O43869 369 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 SLC43A1O75387 559 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 PNMTP11086 282 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 PRG2P13727 222 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 RPS5P46782 204 aaKnown RBP10.29□□□□□ -0.76
TTC28-203ENST00000442232 PDLIM4P50479 330 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 LOXL1Q08397 574 aaPredicted RBP10.29□□□□□ -0.76
TTC28-203ENST00000442232 RGNQ15493 299 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 MAPK11Q15759 364 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 TMEM249Q2WGJ8 235 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 C6orf52Q5T4I8 152 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 GCNT6Q5T4J0 391 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 SLC2A7Q6PXP3 512 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 CREB3L2Q70SY1 520 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 HIPK1Q86Z02 1210 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 ZIC4Q8N9L1 334 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 OR10H5Q8NGA6 315 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 RNF217Q8TC41 542 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 LRRC8CQ8TDW0 803 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 GTF2H4Q92759 462 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 TNFRSF13CQ96RJ3 184 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 KCNK17Q96T54 332 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 MDFIQ99750 246 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 PIMREGQ9BSJ6 248 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 KATNB1Q9BVA0 655 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 PAIP1Q9H074 479 aaKnown RBP10.29□□□□□ -0.76
TTC28-203ENST00000442232 TMBIM4Q9HC24 238 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 BCL2L10Q9HD36 194 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 TCF7L2Q9NQB0 619 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 CDC42EP3Q9UKI2 254 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 CORO2BQ9UQ03 480 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 RCE1Q9Y256 329 aa10.29□□□□□ -0.76
TTC28-203ENST00000442232 ATRQ13535 2644 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 ARPC4-TTLL3A0A0A6YYG9 625 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 IGHV1-18A0A0C4DH31 117 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 NR5A2O00482 541 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 ERCC1P07992 297 aaPredicted RBP10.28□□□□□ -0.76
TTC28-203ENST00000442232 HOXB1P14653 301 aaPredicted RBP10.28□□□□□ -0.76
TTC28-203ENST00000442232 ETS2P15036 469 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 PRKAR1BP31321 381 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 CLDN17P56750 224 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 VLDLRP98155 873 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 HOXC5Q00444 222 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 ROR2Q01974 943 aaKnown RBP10.28□□□□□ -0.76
TTC28-203ENST00000442232 CARTPTQ16568 116 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms